RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 C1orf189Q5VU69 101 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 ARL9Q6T311 187 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 NANOGNBQ7Z5D8 188 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 KCTD20Q7Z5Y7 419 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 SLC35F2Q8IXU6 374 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 ARIH2OSQ8N7S6 290 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 GATSQ8NAP1 163 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 CYB561A3Q8NBI2 242 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 FAM83FQ8NEG4 500 aaPredicted RBP10.67□□□□□ -0.7
USF1-208ENST00000528768 SDR9C7Q8NEX9 313 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 OR4D9Q8NGE8 314 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 ASB15Q8WXK1 588 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 PHYHIPQ92561 330 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 OMA1Q96E52 524 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 ZPBPQ9BS86 351 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 FKRPQ9H9S5 495 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 TEKT2Q9UIF3 430 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 RARRES3Q9UL19 164 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 HIF3AQ9Y2N7 669 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 GRIP1Q9Y3R0 1128 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 SCN2AQ99250 2005 aa10.67□□□□□ -0.7
USF1-208ENST00000528768 TRAV36DV7A0A075B6V5 113 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 CD8B2A6NJW9 211 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 B4E171 279 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 MCIDASD6RGH6 385 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 NKX2-8O15522 239 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 TSPAN2O60636 221 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 ADAM11O75078 769 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 TMEM127O75204 238 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 GATBO75879 557 aaKnown RBP10.66□□□□□ -0.7
USF1-208ENST00000528768 GLCEO94923 617 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 NUDT14O95848 222 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 LALBAP00709 142 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 MT-ATP6P00846 226 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 MRPL3P09001 348 aaKnown RBP10.66□□□□□ -0.7
USF1-208ENST00000528768 CLEC2LP0C7M8 214 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 CD8BP10966 210 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 GNLYP22749 145 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 TACR3P29371 465 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 TALDO1P37837 337 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 CD79BP40259 229 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 TSPAN7P41732 249 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 INPP1P49441 399 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 POLR2HP52434 150 aaKnown RBP10.66□□□□□ -0.7
USF1-208ENST00000528768 RPS4XP62701 263 aaKnown RBP10.66□□□□□ -0.7
USF1-208ENST00000528768 CD226Q15762 336 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 PYDC2Q56P42 97 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 VWA2Q5GFL6 755 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 ZNF362Q5T0B9 420 aaPredicted RBP10.66□□□□□ -0.7
USF1-208ENST00000528768 SLC6A19Q695T7 634 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 FCRLBQ6BAA4 426 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 FAAH2Q6GMR7 532 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 RPL22L1Q6P5R6 122 aaKnown RBP10.66□□□□□ -0.7
USF1-208ENST00000528768 SNX29P2Q8IUI4 249 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 LAX1Q8IWV1 398 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 NLGN4YQ8NFZ3 816 aaPredicted RBP10.66□□□□□ -0.7
USF1-208ENST00000528768 OR5L2Q8NGL0 311 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 MOSPD2Q8NHP6 518 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 TMEM234Q8WY98 164 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 HTRA1Q92743 480 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 C4orf36Q96KX1 117 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 HCAR1Q9BXC0 346 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 VN1R1Q9GZP7 353 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 SRRQ9GZT4 340 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 ADAM19Q9H013 955 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 ISG20L2Q9H9L3 353 aaKnown RBP10.66□□□□□ -0.7
USF1-208ENST00000528768 QPCTLQ9NXS2 382 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 GRHPRQ9UBQ7 328 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 C19orf25Q9UFG5 118 aaPredicted RBP10.66□□□□□ -0.7
USF1-208ENST00000528768 TP53TG5Q9Y2B4 290 aa10.66□□□□□ -0.7
USF1-208ENST00000528768 YARS2Q9Y2Z4 477 aaKnown RBP10.66□□□□□ -0.7
USF1-208ENST00000528768 ITPR3Q14573 2671 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 IGLV3-12A0A075B6K2 115 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 IGHV5-10-1A0A0J9YXX1 117 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 ZC3H12DA2A288 527 aaKnown RBP10.65□□□□□ -0.7
USF1-208ENST00000528768 OR6C70A6NIJ9 312 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 TTLL8A6PVC2 850 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 BLOC1S5-TXNDC5H3BN57 136 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 PHYHO14832 338 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 SNPHO15079 494 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 GPRIN2O60269 458 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 ICOSLGO75144 302 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 OR6A2O95222 327 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 TXNDC12O95881 172 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 PRKAR1AP10644 381 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 NAGAP17050 411 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 SPI1P17947 270 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 TCN2P20062 427 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 POU3F2P20265 443 aaPredicted RBP10.65□□□□□ -0.7
USF1-208ENST00000528768 SDHAP31040 664 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 UQCRFS1P47985 274 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 P2RX1P51575 399 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 BLVRAP53004 296 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 SUMO3P55854 103 aaPredicted RBP10.65□□□□□ -0.7
USF1-208ENST00000528768 SLC26A5P58743 744 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 CTXN1P60606 82 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 ERVK-25P63136 954 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 DCDP81605 110 aaKnown RBP10.65□□□□□ -0.7
USF1-208ENST00000528768 ZNF85Q03923 595 aa10.65□□□□□ -0.7
USF1-208ENST00000528768 SLC3A1Q07837 685 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms