RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 MT-ND1P03886 318 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 HIST1H2ABP04908 130 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 SOD3P08294 240 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 ASAH2BP0C7U1 165 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 ADORA3P0DMS8 318 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 TNFRSF1BP20333 461 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 AHCYP23526 432 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 IFNA8P32881 189 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 OR1E2P47887 323 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 NUDT2P50583 147 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 SLC7A2P52569 658 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 UBE2NP61088 152 aaKnown RBP10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 SLC25A3Q00325 362 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 POU3F1Q03052 451 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 PIN1Q13526 163 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 PGGHGQ32M88 737 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 HIKESHIQ53FT3 197 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 Q5PR19 223 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 SLC22A25Q6T423 547 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 DEF8Q6ZN54 512 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 HIST3H2AQ7L7L0 130 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 DTX2Q86UW9 622 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 C20orf196Q8IYI0 205 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 LIPHQ8WWY8 451 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 HIST1H2ACQ93077 130 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 TRMT61AQ96FX7 289 aaKnown RBP10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 PERPQ96FX8 193 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 TXNDC15Q96J42 360 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 TPD52L3Q96J77 140 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 ADAD1Q96M93 576 aaKnown RBP10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 DHRS9Q9BPW9 319 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 C1QTNF6Q9BXI9 259 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 FAM107BQ9H098 131 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 ALG2Q9H553 416 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 B3GAT2Q9NPZ5 323 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 MEPEQ9NQ76 525 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 TAS2R5Q9NYW4 299 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 CRNNQ9UBG3 495 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 ABCD2Q9UBJ2 740 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 CELSR1Q9NYQ6 3014 aa10.59□□□□□ -0.71
TRAPPC4-209ENST00000528230 AKAP9Q99996 3911 aa10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 ZNF99A8MXY4 864 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 CXCR6O00574 342 aa10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 GSTA4O15217 222 aa10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 PTNP21246 168 aa10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 GSK3BP49841 420 aa10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 CDH11P55287 796 aa10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 PSME3P61289 254 aa10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 GNGT1P63211 74 aa10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 ARF1P84077 181 aaKnown RBP10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 ST3GAL3Q11203 375 aa10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 CEACAM16Q2WEN9 425 aa10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 AGAP6Q5VW22 663 aa10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 ZNF544Q6NX49 715 aa10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 CBLL1Q75N03 491 aa10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 ZNF627Q7L945 461 aa10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 YTHDF3Q7Z739 585 aaKnown RBP10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 PIGWQ7Z7B1 504 aa10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 NKAIN4Q8IVV8 208 aa10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 OR6X1Q8NH79 312 aa10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 TMEM239Q8WW34 195 aa10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 PRRC1Q96M27 445 aa10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 BDH2Q9BUT1 245 aa10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 TRAF4Q9BUZ4 470 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 EMC6Q9BV81 110 aa10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 NELFAQ9H3P2 528 aa10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 CRLF2Q9HC73 371 aa10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 MED29Q9NX70 200 aa10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 POU2F3Q9UKI9 436 aa10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 USF3Q68DE3 2245 aa10.58□□□□□ -0.72
TRAPPC4-209ENST00000528230 TEP1Q99973 2627 aaKnown RBP10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 PLCE1Q9P212 2302 aa10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 E7EQL1 145 aa10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 C11orf98E9PRG8 122 aa10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 M0R3G1 203 aa10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 KPNA4O00629 521 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 RNF13O43567 381 aa10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 SHOX2O60902 331 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 CD8AP01732 235 aa10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 UMPSP11172 480 aa10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 IFNGR1P15260 489 aa10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 CBR1P16152 277 aa10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 FUT1P19526 365 aa10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 TTKP33981 857 aa10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 UGT2B15P54855 530 aa10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 ATP5J2P56134 94 aa10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 ETFDHQ16134 617 aa10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 PHYHD1Q5SRE7 291 aa10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 SLC35D2Q76EJ3 337 aa10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 SLC46A3Q7Z3Q1 461 aa10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 LRRC17Q8N6Y2 441 aa10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 OR6N1Q8NGY5 312 aa10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 TMEM255BQ8WV15 326 aa10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 GTPBP3Q969Y2 492 aaKnown RBP10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 SGTBQ96EQ0 304 aa10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 C18orf12Q96KH6 178 aa10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 SLC38A2Q96QD8 506 aa10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 KCTD14Q9BQ13 255 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 SPAG4Q9NPE6 437 aa10.57□□□□□ -0.72
TRAPPC4-209ENST00000528230 GMPR2Q9P2T1 348 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms