RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 SLC35F4A4IF30 521 aa13.57□□□□□ -0.24
CAPN1-213ENST00000527897 ZNF726A6NNF4 738 aa13.57□□□□□ -0.24
CAPN1-213ENST00000527897 OVOL3O00110 214 aa13.57□□□□□ -0.24
CAPN1-213ENST00000527897 PLPP3O14495 311 aa13.57□□□□□ -0.24
CAPN1-213ENST00000527897 SLC22A2O15244 555 aa13.57□□□□□ -0.24
CAPN1-213ENST00000527897 FZD7O75084 574 aa13.57□□□□□ -0.24
CAPN1-213ENST00000527897 NDUFS7O75251 213 aa13.57□□□□□ -0.24
CAPN1-213ENST00000527897 MT-ATP6P00846 226 aa13.57□□□□□ -0.24
CAPN1-213ENST00000527897 IFNA14P01570 189 aa13.57□□□□□ -0.24
CAPN1-213ENST00000527897 CD8AP01732 235 aa13.57□□□□□ -0.24
CAPN1-213ENST00000527897 HIST1H2ABP04908 130 aa13.57□□□□□ -0.24
CAPN1-213ENST00000527897 COX4I1P13073 169 aa13.57□□□□□ -0.24
CAPN1-213ENST00000527897 SH3BGRP55822 239 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-213ENST00000527897 CAMK2DQ13557 499 aa13.57□□□□□ -0.24
CAPN1-213ENST00000527897 ANKRD16Q6P6B7 361 aa13.57□□□□□ -0.24
CAPN1-213ENST00000527897 LINC00114Q6XXX2 140 aa13.57□□□□□ -0.24
CAPN1-213ENST00000527897 HIST3H2AQ7L7L0 130 aa13.57□□□□□ -0.24
CAPN1-213ENST00000527897 SPATA21Q7Z572 469 aa13.57□□□□□ -0.24
CAPN1-213ENST00000527897 MICU2Q8IYU8 434 aa13.57□□□□□ -0.24
CAPN1-213ENST00000527897 OR6N1Q8NGY5 312 aa13.57□□□□□ -0.24
CAPN1-213ENST00000527897 OR5J2Q8NH18 312 aa13.57□□□□□ -0.24
CAPN1-213ENST00000527897 HIST1H2ACQ93077 130 aa13.57□□□□□ -0.24
CAPN1-213ENST00000527897 ZNF837Q96EG3 531 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-213ENST00000527897 HS6ST2Q96MM7 605 aa13.57□□□□□ -0.24
CAPN1-213ENST00000527897 DHRS9Q9BPW9 319 aa13.57□□□□□ -0.24
CAPN1-213ENST00000527897 CACNG6Q9BXT2 260 aa13.57□□□□□ -0.24
CAPN1-213ENST00000527897 NANSQ9NR45 359 aa13.57□□□□□ -0.24
CAPN1-213ENST00000527897 GMPR2Q9P2T1 348 aaKnown RBP13.57□□□□□ -0.24
CAPN1-213ENST00000527897 GDF2Q9UK05 429 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-213ENST00000527897 NOX1Q9Y5S8 564 aa13.57□□□□□ -0.24
CAPN1-213ENST00000527897 ALPK2Q86TB3 2170 aa13.56□□□□□ -0.24
CAPN1-213ENST00000527897 IGHV1-18A0A0C4DH31 117 aa13.56□□□□□ -0.24
CAPN1-213ENST00000527897 LOC102725191A0A1B0GVB3 256 aa13.56□□□□□ -0.24
CAPN1-213ENST00000527897 ATP8B1O43520 1251 aa13.56□□□□□ -0.24
CAPN1-213ENST00000527897 RNF13O43567 381 aa13.56□□□□□ -0.24
CAPN1-213ENST00000527897 LYPD3O95274 346 aa13.56□□□□□ -0.24
CAPN1-213ENST00000527897 PAX1P15863 534 aa13.56□□□□□ -0.24
CAPN1-213ENST00000527897 KDELR2P33947 212 aa13.56□□□□□ -0.24
CAPN1-213ENST00000527897 TTKP33981 857 aa13.56□□□□□ -0.24
CAPN1-213ENST00000527897 SEC24CP53992 1094 aa13.56□□□□□ -0.24
CAPN1-213ENST00000527897 BIDP55957 195 aa13.56□□□□□ -0.24
CAPN1-213ENST00000527897 ZNF74Q16587 644 aa13.56□□□□□ -0.24
CAPN1-213ENST00000527897 CLEC12BQ2HXU8 276 aa13.56□□□□□ -0.24
CAPN1-213ENST00000527897 CYBRD1Q53TN4 286 aa13.56□□□□□ -0.24
CAPN1-213ENST00000527897 PHYHD1Q5SRE7 291 aa13.56□□□□□ -0.24
CAPN1-213ENST00000527897 TMEM123Q8N131 208 aa13.56□□□□□ -0.24
CAPN1-213ENST00000527897 MUC15Q8N387 334 aa13.56□□□□□ -0.24
CAPN1-213ENST00000527897 LRRC17Q8N6Y2 441 aa13.56□□□□□ -0.24
CAPN1-213ENST00000527897 HTRA1Q92743 480 aa13.56□□□□□ -0.24
CAPN1-213ENST00000527897 MPP4Q96JB8 637 aa13.56□□□□□ -0.24
CAPN1-213ENST00000527897 COX4I2Q96KJ9 171 aa13.56□□□□□ -0.24
CAPN1-213ENST00000527897 SLC38A2Q96QD8 506 aa13.56□□□□□ -0.24
CAPN1-213ENST00000527897 OBP2BQ9NPH6 170 aa13.56□□□□□ -0.24
CAPN1-213ENST00000527897 B3GAT2Q9NPZ5 323 aa13.56□□□□□ -0.24
CAPN1-213ENST00000527897 CMTM6Q9NX76 183 aa13.56□□□□□ -0.24
CAPN1-213ENST00000527897 GSTA4O15217 222 aa13.55□□□□□ -0.24
CAPN1-213ENST00000527897 IGHV4-39P01824 125 aa13.55□□□□□ -0.24
CAPN1-213ENST00000527897 IFNGR1P15260 489 aa13.55□□□□□ -0.24
CAPN1-213ENST00000527897 ACVR1BP36896 505 aa13.55□□□□□ -0.24
CAPN1-213ENST00000527897 NUDT2P50583 147 aa13.55□□□□□ -0.24
CAPN1-213ENST00000527897 SLC7A2P52569 658 aa13.55□□□□□ -0.24
CAPN1-213ENST00000527897 NPRL3Q12980 569 aa13.55□□□□□ -0.24
CAPN1-213ENST00000527897 TNK1Q13470 666 aa13.55□□□□□ -0.24
CAPN1-213ENST00000527897 PIN1Q13526 163 aaPredicted RBP13.55□□□□□ -0.24
CAPN1-213ENST00000527897 VHLLQ6RSH7 139 aa13.55□□□□□ -0.24
CAPN1-213ENST00000527897 NANOGNBQ7Z5D8 188 aa13.55□□□□□ -0.24
CAPN1-213ENST00000527897 ARPINQ7Z6K5 226 aa13.55□□□□□ -0.24
CAPN1-213ENST00000527897 PXKQ7Z7A4 578 aa13.55□□□□□ -0.24
CAPN1-213ENST00000527897 DTX2Q86UW9 622 aa13.55□□□□□ -0.24
CAPN1-213ENST00000527897 NKAIN4Q8IVV8 208 aa13.55□□□□□ -0.24
CAPN1-213ENST00000527897 WDFY1Q8IWB7 410 aa13.55□□□□□ -0.24
CAPN1-213ENST00000527897 C20orf196Q8IYI0 205 aa13.55□□□□□ -0.24
CAPN1-213ENST00000527897 ULBP2Q9BZM5 246 aa13.55□□□□□ -0.24
CAPN1-213ENST00000527897 PCDHAC1Q9H158 963 aa13.55□□□□□ -0.24
CAPN1-213ENST00000527897 NELFAQ9H3P2 528 aa13.55□□□□□ -0.24
CAPN1-213ENST00000527897 CBLN4Q9NTU7 201 aa13.55□□□□□ -0.24
CAPN1-213ENST00000527897 RIMS3Q9UJD0 308 aa13.55□□□□□ -0.24
CAPN1-213ENST00000527897 POFUT2Q9Y2G5 429 aa13.55□□□□□ -0.24
CAPN1-213ENST00000527897 ZNF99A8MXY4 864 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-213ENST00000527897 BLOC1S5-TXNDC5H3BN57 136 aa13.54□□□□□ -0.24
CAPN1-213ENST00000527897 RPL36A-HNRNPH2H7BZ11 118 aa13.54□□□□□ -0.24
CAPN1-213ENST00000527897 ZNF682O95780 498 aa13.54□□□□□ -0.24
CAPN1-213ENST00000527897 CRYAAP02489 173 aa13.54□□□□□ -0.24
CAPN1-213ENST00000527897 CD79AP11912 226 aa13.54□□□□□ -0.24
CAPN1-213ENST00000527897 CSNK1A1P48729 337 aa13.54□□□□□ -0.24
CAPN1-213ENST00000527897 IDH3GP51553 393 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-213ENST00000527897 LIPEQ05469 1076 aa13.54□□□□□ -0.24
CAPN1-213ENST00000527897 MELKQ14680 651 aa13.54□□□□□ -0.24
CAPN1-213ENST00000527897 SLC35D2Q76EJ3 337 aa13.54□□□□□ -0.24
CAPN1-213ENST00000527897 TREML1Q86YW5 311 aa13.54□□□□□ -0.24
CAPN1-213ENST00000527897 SLC15A3Q8IY34 581 aa13.54□□□□□ -0.24
CAPN1-213ENST00000527897 MAPK1IP1LQ8NDC0 245 aa13.54□□□□□ -0.24
CAPN1-213ENST00000527897 ANKK1Q8NFD2 765 aa13.54□□□□□ -0.24
CAPN1-213ENST00000527897 PFN4Q8NHR9 129 aa13.54□□□□□ -0.24
CAPN1-213ENST00000527897 MAGEE2Q8TD90 523 aaPredicted RBP13.54□□□□□ -0.24
CAPN1-213ENST00000527897 TMEM255BQ8WV15 326 aa13.54□□□□□ -0.24
CAPN1-213ENST00000527897 LZICQ8WZA0 190 aa13.54□□□□□ -0.24
CAPN1-213ENST00000527897 ADAD1Q96M93 576 aaKnown RBP13.54□□□□□ -0.24
CAPN1-213ENST00000527897 PRSS27Q9BQR3 290 aa13.54□□□□□ -0.24
CAPN1-213ENST00000527897 SEC61A2Q9H9S3 476 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms