RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 ZNF311Q5JNZ3 666 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 RPS26P11Q5JNZ5 115 aaPredicted RBP13.85□□□□□ -0.19
PTPRU-210ENST00000527027 PHYHD1Q5SRE7 291 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 FAM69AQ5T7M9 428 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 ZNF417Q8TAU3 575 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 SLC35B4Q969S0 331 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 ZMYND19Q96E35 227 aaPredicted RBP13.85□□□□□ -0.19
PTPRU-210ENST00000527027 TMEM19Q96HH6 336 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 MS4A3Q96HJ5 214 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 ZNF75AQ96N20 296 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 ZNF587Q96SQ5 575 aaPredicted RBP13.85□□□□□ -0.19
PTPRU-210ENST00000527027 NARFLQ9H6Q4 476 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 TPT1P8Q9HAU6 139 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 C12orf10Q9HB07 376 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 THUMPD1Q9NXG2 353 aaKnown RBP13.85□□□□□ -0.19
PTPRU-210ENST00000527027 NOX1Q9Y5S8 564 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 TMEM89A2RUT3 159 aa13.84□□□□□ -0.19
PTPRU-210ENST00000527027 ATP8B1O43520 1251 aa13.84□□□□□ -0.19
PTPRU-210ENST00000527027 TRAF3IP2O43734 574 aaPredicted RBP13.84□□□□□ -0.19
PTPRU-210ENST00000527027 TFP02787 698 aa13.84□□□□□ -0.19
PTPRU-210ENST00000527027 SAGP10523 405 aaPredicted RBP13.84□□□□□ -0.19
PTPRU-210ENST00000527027 ZNF14P17017 642 aaPredicted RBP13.84□□□□□ -0.19
PTPRU-210ENST00000527027 EGR1P18146 543 aa13.84□□□□□ -0.19
PTPRU-210ENST00000527027 BGNP21810 368 aa13.84□□□□□ -0.19
PTPRU-210ENST00000527027 GRPRP30550 384 aa13.84□□□□□ -0.19
PTPRU-210ENST00000527027 ALDH3B1P43353 468 aa13.84□□□□□ -0.19
PTPRU-210ENST00000527027 SEC24CP53992 1094 aa13.84□□□□□ -0.19
PTPRU-210ENST00000527027 PIGFQ07326 219 aa13.84□□□□□ -0.19
PTPRU-210ENST00000527027 GSG1Q2KHT4 349 aa13.84□□□□□ -0.19
PTPRU-210ENST00000527027 TRMT5Q32P41 509 aaKnown RBP13.84□□□□□ -0.19
PTPRU-210ENST00000527027 REP15Q6BDI9 236 aa13.84□□□□□ -0.19
PTPRU-210ENST00000527027 SHQ1Q6PI26 577 aaKnown RBP13.84□□□□□ -0.19
PTPRU-210ENST00000527027 C5orf46Q6UWT4 87 aa13.84□□□□□ -0.19
PTPRU-210ENST00000527027 C6orf89Q6UWU4 347 aa13.84□□□□□ -0.19
PTPRU-210ENST00000527027 C20orf196Q8IYI0 205 aa13.84□□□□□ -0.19
PTPRU-210ENST00000527027 C3orf56Q8N813 242 aa13.84□□□□□ -0.19
PTPRU-210ENST00000527027 SGMS2Q8NHU3 365 aa13.84□□□□□ -0.19
PTPRU-210ENST00000527027 SLC38A4Q969I6 547 aa13.84□□□□□ -0.19
PTPRU-210ENST00000527027 LRR1Q96L50 414 aa13.84□□□□□ -0.19
PTPRU-210ENST00000527027 LRRC37BQ96QE4 947 aa13.84□□□□□ -0.19
PTPRU-210ENST00000527027 SYT3Q9BQG1 590 aa13.84□□□□□ -0.19
PTPRU-210ENST00000527027 LPAR2Q9HBW0 351 aa13.84□□□□□ -0.19
PTPRU-210ENST00000527027 SSU72Q9NP77 194 aaKnown RBP13.84□□□□□ -0.19
PTPRU-210ENST00000527027 TREM2Q9NZC2 230 aa13.84□□□□□ -0.19
PTPRU-210ENST00000527027 RPS6KB2Q9UBS0 482 aa13.84□□□□□ -0.19
PTPRU-210ENST00000527027 MS4A18H0YCH9 400 aa13.83□□□□□ -0.2
PTPRU-210ENST00000527027 WNT9BO14905 357 aa13.83□□□□□ -0.2
PTPRU-210ENST00000527027 TM9SF1O15321 606 aa13.83□□□□□ -0.2
PTPRU-210ENST00000527027 SLC22A3O75751 556 aa13.83□□□□□ -0.2
PTPRU-210ENST00000527027 ANP32DO95626 131 aa13.83□□□□□ -0.2
PTPRU-210ENST00000527027 LMO4P61968 165 aa13.83□□□□□ -0.2
PTPRU-210ENST00000527027 MRPS11P82912 194 aaKnown RBP13.83□□□□□ -0.2
PTPRU-210ENST00000527027 MS4A18Q3C1V0 323 aa13.83□□□□□ -0.2
PTPRU-210ENST00000527027 GKAP1Q5VSY0 366 aaPredicted RBP13.83□□□□□ -0.2
PTPRU-210ENST00000527027 CARD17Q5XLA6 110 aa13.83□□□□□ -0.2
PTPRU-210ENST00000527027 FAHD2BQ6P2I3 314 aaPredicted RBP13.83□□□□□ -0.2
PTPRU-210ENST00000527027 USP43Q70EL4 1123 aa13.83□□□□□ -0.2
PTPRU-210ENST00000527027 ZNF627Q7L945 461 aa13.83□□□□□ -0.2
PTPRU-210ENST00000527027 LRP11Q86VZ4 500 aa13.83□□□□□ -0.2
PTPRU-210ENST00000527027 ADPRHL1Q8NDY3 354 aa13.83□□□□□ -0.2
PTPRU-210ENST00000527027 OR51F2Q8NH61 342 aa13.83□□□□□ -0.2
PTPRU-210ENST00000527027 FAM216AQ8WUB2 273 aa13.83□□□□□ -0.2
PTPRU-210ENST00000527027 GCDHQ92947 438 aaPredicted RBP13.83□□□□□ -0.2
PTPRU-210ENST00000527027 FAHD2AQ96GK7 314 aa13.83□□□□□ -0.2
PTPRU-210ENST00000527027 DENND2DQ9H6A0 471 aaPredicted RBP13.83□□□□□ -0.2
PTPRU-210ENST00000527027 WDR55Q9H6Y2 383 aaPredicted RBP13.83□□□□□ -0.2
PTPRU-210ENST00000527027 BCL2L10Q9HD36 194 aa13.83□□□□□ -0.2
PTPRU-210ENST00000527027 ZNF275Q9NSD4 429 aaPredicted RBP13.83□□□□□ -0.2
PTPRU-210ENST00000527027 PCDHB10Q9UN67 800 aa13.83□□□□□ -0.2
PTPRU-210ENST00000527027 POFUT2Q9Y2G5 429 aa13.83□□□□□ -0.2
PTPRU-210ENST00000527027 PKD1L1Q8TDX9 2849 aa13.83□□□□□ -0.2
PTPRU-210ENST00000527027 TRAV36DV7A0A075B6V5 113 aa13.82□□□□□ -0.2
PTPRU-210ENST00000527027 PPIHO43447 177 aaKnown RBP13.82□□□□□ -0.2
PTPRU-210ENST00000527027 GAAP10253 952 aa13.82□□□□□ -0.2
PTPRU-210ENST00000527027 HLA-DOBP13765 273 aa13.82□□□□□ -0.2
PTPRU-210ENST00000527027 CBLP22681 906 aa13.82□□□□□ -0.2
PTPRU-210ENST00000527027 EPHA3P29320 983 aa13.82□□□□□ -0.2
PTPRU-210ENST00000527027 AQP5P55064 265 aa13.82□□□□□ -0.2
PTPRU-210ENST00000527027 RPS23P62266 143 aaKnown RBP13.82□□□□□ -0.2
PTPRU-210ENST00000527027 RAB1AP62820 205 aa13.82□□□□□ -0.2
PTPRU-210ENST00000527027 MYBPC1Q00872 1141 aa13.82□□□□□ -0.2
PTPRU-210ENST00000527027 BST1Q10588 318 aa13.82□□□□□ -0.2
PTPRU-210ENST00000527027 MAD2L1BPQ15013 274 aaPredicted RBP13.82□□□□□ -0.2
PTPRU-210ENST00000527027 FXNQ16595 210 aa13.82□□□□□ -0.2
PTPRU-210ENST00000527027 ZNF813Q6ZN06 617 aa13.82□□□□□ -0.2
PTPRU-210ENST00000527027 UEVLDQ8IX04 471 aa13.82□□□□□ -0.2
PTPRU-210ENST00000527027 TEX29Q8N6K0 151 aa13.82□□□□□ -0.2
PTPRU-210ENST00000527027 GOLGA6L1Q8N7Z2 621 aa13.82□□□□□ -0.2
PTPRU-210ENST00000527027 LSMEM1Q8N8F7 131 aa13.82□□□□□ -0.2
PTPRU-210ENST00000527027 YIPF5Q969M3 257 aa13.82□□□□□ -0.2
PTPRU-210ENST00000527027 EMC6Q9BV81 110 aa13.82□□□□□ -0.2
PTPRU-210ENST00000527027 B3GAT2Q9NPZ5 323 aa13.82□□□□□ -0.2
PTPRU-210ENST00000527027 MYEF2Q9P2K5 600 aaKnown RBP13.82□□□□□ -0.2
PTPRU-210ENST00000527027 DYSFO75923 2080 aa13.82□□□□□ -0.2
PTPRU-210ENST00000527027 IGKV1D-42A0A075B6H8 117 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 TRAV20A0A0B4J274 112 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 A0A1B0GWA3 101 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 TRIM77I1YAP6 450 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 HDAC3O15379 428 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 RGS16O15492 202 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms