RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 ADGRG7Q96K78 797 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 FAM218AQ96MZ4 157 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 SERPINB11Q96P15 392 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 NAT9Q9BTE0 207 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 CABLES2Q9BTV7 478 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 DGCR6LQ9BY27 220 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 ZNF385DQ9H6B1 395 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 PATZ1Q9HBE1 687 aaKnown RBP2.53□□□□□ -2
TRAPPC4-207ENST00000526141 SAMSN1Q9NSI8 373 aaKnown RBP2.53□□□□□ -2
TRAPPC4-207ENST00000526141 TREX1Q9NSU2 369 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 ELOVL2Q9NXB9 296 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 CCDC59Q9P031 241 aaKnown RBP2.53□□□□□ -2
TRAPPC4-207ENST00000526141 DCDC2Q9UHG0 476 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 CLEC2DQ9UHP7 191 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 NXT1Q9UKK6 140 aaKnown RBP2.53□□□□□ -2
TRAPPC4-207ENST00000526141 UBQLN1Q9UMX0 589 aaKnown RBP2.53□□□□□ -2
TRAPPC4-207ENST00000526141 RPL36Q9Y3U8 105 aaKnown RBP2.53□□□□□ -2
TRAPPC4-207ENST00000526141 TSSC4Q9Y5U2 329 aaPredicted RBP2.53□□□□□ -2
TRAPPC4-207ENST00000526141 V9GYY9 64 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 POLR3AO14802 1390 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 UBN2Q6ZU65 1347 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 USP42Q9H9J4 1324 aaKnown RBP2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 B4DXG7 233 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 F8VP50 259 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 PRAMEF26H0Y7S4 382 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 KLRC4-KLRK1H3BQV0 150 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 LIN7AO14910 233 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 TOX3O15405 576 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 B4GALT5O43286 388 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 FRAT2O75474 233 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 CDC123O75794 336 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 SC5DO75845 299 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 PLEKHA8P1O95397 391 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 FCGR3AP08637 254 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 KRT7P08729 469 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 HOXD4P09016 255 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 OR9G9P0C7N8 305 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 TRIM49P0CI25 452 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 TRIM49CP0CI26 452 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 SMIM10L1P0DMW3 83 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 KDELR2P33947 212 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 MAP2K2P36507 400 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 CSNK1A1P48729 337 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 ATP4BP51164 291 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 SSR4P51571 173 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 EFNA3P52797 238 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 CLDN6P56747 220 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 RIPK4P57078 832 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 UBE2MP61081 183 aaKnown RBP2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 ATP6V0D1P61421 351 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 RPS14P62263 151 aaKnown RBP2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 TRAM2Q15035 370 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 MLF2Q15773 248 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 THEM4Q5T1C6 240 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 LINC00242Q5T6M2 205 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 SEL1L2Q5TEA6 688 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 APOBEC3HQ6NTF7 200 aaKnown RBP2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 TUBA1AQ71U36 451 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 CMC1Q7Z7K0 106 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 CRLF3Q8IUI8 442 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 ZNF547Q8IVP9 402 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 SAMD12Q8N8I0 201 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 NOXO1Q8NFA2 376 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 OR5T1Q8NG75 326 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 OR2AP1Q8NGE2 309 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 OR9A4Q8NGU2 314 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 OR6K2Q8NGY2 324 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 OR2L8Q8NGY9 312 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 FANK1Q8TC84 345 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 MRAPQ8TCY5 172 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 ACER1Q8TDN7 264 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 PYROXD1Q8WU10 500 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 TRUB1Q8WWH5 349 aaKnown RBP2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 TM9SF4Q92544 642 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 TFGQ92734 400 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 NEIL2Q969S2 332 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 TMEM80Q96HE8 168 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 SMIM10Q96HG1 83 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 SEC22AQ96IW7 307 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 CELF6Q96J87 481 aaKnown RBP2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 OXGR1Q96P68 337 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 FAIM2Q9BWQ8 316 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 ELOVL4Q9GZR5 314 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 WDR13Q9H1Z4 485 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 RETNQ9HD89 108 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 MEPEQ9NQ76 525 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 IMP3Q9NV31 184 aaKnown RBP2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 HRASLS2Q9NWW9 162 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 NUDT4Q9NZJ9 180 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 WARS2Q9UGM6 360 aaKnown RBP2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 ATPIF1Q9UII2 106 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 FAF1Q9UNN5 650 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 NTNG1Q9Y2I2 539 aa2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 RCL1Q9Y2P8 373 aaKnown RBP2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 MRPS28Q9Y2Q9 187 aaKnown RBP2.52□□□□□ -2.01
TRAPPC4-207ENST00000526141 PLEKHH1Q9ULM0 1364 aa2.51□□□□□ -2.01
TRAPPC4-207ENST00000526141 RAD50Q92878 1312 aa2.51□□□□□ -2.01
TRAPPC4-207ENST00000526141 A0A0G2JLW4 131 aa2.51□□□□□ -2.01
TRAPPC4-207ENST00000526141 A0A1B0GTH9 108 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms