RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 AAGABQ6PD74 315 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 DLEU7Q6UYE1 221 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 Q6ZPB1 254 aaPredicted RBP4.59□□□□□ -1.67
SVIP-202ENST00000525670 MSANTD1Q6ZTZ1 278 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 EIF3MQ7L2H7 374 aaKnown RBP4.59□□□□□ -1.67
SVIP-202ENST00000525670 HRNRQ86YZ3 2850 aaPredicted RBP4.59□□□□□ -1.67
SVIP-202ENST00000525670 CLIP4Q8N3C7 705 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 RNF148Q8N7C7 305 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 RELL2Q8NC24 303 aaPredicted RBP4.59□□□□□ -1.67
SVIP-202ENST00000525670 CHDHQ8NE62 594 aaPredicted RBP4.59□□□□□ -1.67
SVIP-202ENST00000525670 OR52P1PQ8NH57 321 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 OR10A6Q8NH74 314 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 OR10D3Q8NH80 312 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 MIPOL1Q8TD10 442 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 CA5BP1Q8WTZ4 195 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 RNF138Q8WVD3 245 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 ROBO4Q8WZ75 1007 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 RND1Q92730 232 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 NMD3Q96D46 503 aaKnown RBP4.59□□□□□ -1.67
SVIP-202ENST00000525670 OR5B2Q96R09 309 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 CGREF1Q99674 301 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 AKAP9Q99996 3911 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 TREX2Q9BQ50 279 aaPredicted RBP4.59□□□□□ -1.67
SVIP-202ENST00000525670 WFDC6Q9BQY6 131 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 PIGQQ9BRB3 760 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 SIKE1Q9BRV8 207 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 TTYH2Q9BSA4 534 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 SRXN1Q9BYN0 137 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 PRRG4Q9BZD6 226 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 CCDC134Q9H6E4 229 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 SLC52A3Q9NQ40 469 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 NKX1-2Q9UD57 310 aaPredicted RBP4.59□□□□□ -1.67
SVIP-202ENST00000525670 ANGPT4Q9Y264 503 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 ZNF835Q9Y2P0 537 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 PCDHGB3Q9Y5G1 929 aa4.59□□□□□ -1.67
SVIP-202ENST00000525670 CSMD2Q7Z408 3487 aa4.59□□□□□ -1.68
SVIP-202ENST00000525670 TACC2O95359 2948 aa4.59□□□□□ -1.68
SVIP-202ENST00000525670 FBN2P35556 2912 aa4.59□□□□□ -1.68
SVIP-202ENST00000525670 IGKV2D-30A0A075B6S6 120 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 TRBV5-3A0A0A0MS03 114 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 A0A0J9YW62 118 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 TMEM72A0PK05 275 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 CLEC18AA5D8T8 446 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 GMNCA6NCL1 334 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 CD8B2A6NJW9 211 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 SLC22A20A6NK97 555 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 DUXAA6NLW8 204 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 KPNA4O00629 521 aaPredicted RBP4.58□□□□□ -1.68
SVIP-202ENST00000525670 SNX3O60493 162 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 TPST1O60507 370 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 WDR1O75083 606 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 SERPINI2O75830 405 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 AQP8O94778 261 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 TOXO94900 526 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 CLDN14O95500 239 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 AGR2O95994 175 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 PLGP00747 810 aaPredicted RBP4.58□□□□□ -1.68
SVIP-202ENST00000525670 TFPTP0C1Z6 253 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 LINGO3P0C6S8 592 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 TMIGD3P0DMS9 266 aaPredicted RBP4.58□□□□□ -1.68
SVIP-202ENST00000525670 GP1BBP13224 206 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 NCK1P16333 377 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 ZNF708P17019 499 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 TCN1P20061 433 aaPredicted RBP4.58□□□□□ -1.68
SVIP-202ENST00000525670 PGM1P36871 562 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 SLC7A2P52569 658 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 ZNF136P52737 540 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 SMSP52788 366 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 CLDN15P56746 228 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 RGS8P57771 180 aaPredicted RBP4.58□□□□□ -1.68
SVIP-202ENST00000525670 NCALDP61601 193 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 PSPHP78330 225 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 KCNJ10P78508 379 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 CDK6Q00534 326 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 IL1RL1Q01638 556 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 DMTNQ08495 405 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 CYLC2Q14093 348 aaPredicted RBP4.58□□□□□ -1.68
SVIP-202ENST00000525670 GANABQ14697 944 aaKnown RBP4.58□□□□□ -1.68
SVIP-202ENST00000525670 MAPRE2Q15555 327 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 ZNF141Q15928 474 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 TMEM176BQ3YBM2 270 aaPredicted RBP4.58□□□□□ -1.68
SVIP-202ENST00000525670 RUNDC3AQ59EK9 446 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 ZNF311Q5JNZ3 666 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 LRIF1Q5T3J3 769 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 HBMQ6B0K9 141 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 TMEM81Q6P7N7 255 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 ENPP6Q6UWR7 440 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 CLEC18BQ6UXF7 455 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 LRRC74BQ6ZQY2 392 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 CHMP1BQ7LBR1 199 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 PTOV1Q86YD1 416 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 ANKRD13BQ86YJ7 626 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 RBM45Q8IUH3 476 aaKnown RBP4.58□□□□□ -1.68
SVIP-202ENST00000525670 LACC1Q8IV20 430 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 PEX5LQ8IYB4 626 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 GTPBP8Q8N3Z3 284 aaPredicted RBP4.58□□□□□ -1.68
SVIP-202ENST00000525670 CLEC18CQ8NCF0 446 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 FAM156AQ8NDB6 213 aa4.58□□□□□ -1.68
SVIP-202ENST00000525670 RBM15BQ8NDT2 890 aaKnown RBP4.58□□□□□ -1.68
SVIP-202ENST00000525670 OR5W2Q8NH69 310 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms