RNA–Protein interactions for RNA: ENST00000525665.5

PSMD13-204, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5

Gene PSMD13, Length 1,632 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-204	ENST00000525665	IGKV3D-15	A0A087WSY6	115 aa		13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	ZNF724	A8MTY0	619 aa		13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	TRAF3IP2	O43734	574 aa	Predicted RBP	13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	AKAP8	O43823	692 aa	Known RBP	13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	PPP1R3D	O95685	299 aa		13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	BCL10	O95999	233 aa		13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	YES1	P07947	543 aa		13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	GLI4	P10075	376 aa		13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	IFNGR1	P15260	489 aa		13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	GNLY	P22749	145 aa		13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	TIMP3	P35625	211 aa		13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	DAP3	P51398	398 aa	Known RBP	13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	RPS6KA3	P51812	740 aa		13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	CLDN17	P56750	224 aa		13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	PMPCA	Q10713	525 aa		13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	NPRL3	Q12980	569 aa		13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	SLC35D2	Q76EJ3	337 aa		13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	OR2T33	Q8NG76	320 aa		13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	ZFP3	Q96NJ6	502 aa		13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	RDH12	Q96NR8	316 aa		13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	GABARAPL3	Q9BY60	117 aa		13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	TOR3A	Q9H497	397 aa		13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	BCO1	Q9HAY6	547 aa		13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	GP6	Q9HCN6	339 aa		13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	MED29	Q9NX70	200 aa		13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	NOSIP	Q9Y314	301 aa	Known RBP	13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	IER3IP1	Q9Y5U9	82 aa		13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	FLVCR1	Q9Y5Y0	555 aa		13.57	□□□□□ -0.24
PSMD13-204	ENST00000525665	DOCK7	Q96N67	2140 aa		13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	ARHGAP21	Q5T5U3	1957 aa		13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	SMG1	Q96Q15	3661 aa	Known RBP	13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	CCL21	O00585	134 aa		13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	SNAP29	O95721	258 aa		13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	TMIGD3	P0DMS9	266 aa	Predicted RBP	13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	NOS3	P29474	1203 aa		13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	VHL	P40337	213 aa		13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	UQCRFS1	P47985	274 aa		13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	MELK	Q14680	651 aa		13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	GINS1	Q14691	196 aa		13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	ACKR1	Q16570	336 aa		13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	EIF2S3L	Q2VIR3	472 aa	Known RBP	13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	RIPPLY2	Q5TAB7	128 aa		13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	SLC27A4	Q6P1M0	643 aa		13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	IQCF1	Q8N6M8	205 aa		13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	PRR7	Q8TB68	274 aa		13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	ERMAP	Q96PL5	475 aa	Predicted RBP	13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	ZNF385A	Q96PM9	386 aa	Known RBP	13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	TEX12	Q9BXU0	123 aa		13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	TXNIP	Q9H3M7	391 aa		13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	NRIP3	Q9NQ35	241 aa		13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	GRHPR	Q9UBQ7	328 aa		13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	ING1	Q9UK53	422 aa	Predicted RBP	13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	ZNF346	Q9UL40	294 aa	Known RBP	13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	BAIAP2	Q9UQB8	552 aa		13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	MEMO1	Q9Y316	297 aa		13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	EMC9	Q9Y3B6	208 aa		13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	ADAM18	Q9Y3Q7	739 aa		13.56	□□□□□ -0.24
PSMD13-204	ENST00000525665	NPIPB13	A6NJU9	1138 aa		13.55	□□□□□ -0.24
PSMD13-204	ENST00000525665	ZNF726	A6NNF4	738 aa		13.55	□□□□□ -0.24
PSMD13-204	ENST00000525665	NPIPB4	C9JG80	1138 aa		13.55	□□□□□ -0.24
PSMD13-204	ENST00000525665	SS18L1	O75177	396 aa	Predicted RBP	13.55	□□□□□ -0.24
PSMD13-204	ENST00000525665	IGHM	P01871	453 aa		13.55	□□□□□ -0.24
PSMD13-204	ENST00000525665	AGTR1	P30556	359 aa		13.55	□□□□□ -0.24
PSMD13-204	ENST00000525665	POLR2I	P36954	125 aa	Known RBP	13.55	□□□□□ -0.24
PSMD13-204	ENST00000525665	GIPR	P48546	466 aa		13.55	□□□□□ -0.24
PSMD13-204	ENST00000525665	SMS	P52788	366 aa		13.55	□□□□□ -0.24
PSMD13-204	ENST00000525665	BID	P55957	195 aa		13.55	□□□□□ -0.24
PSMD13-204	ENST00000525665	RPL27	P61353	136 aa	Known RBP	13.55	□□□□□ -0.24
PSMD13-204	ENST00000525665	SIRPA	P78324	504 aa		13.55	□□□□□ -0.24
PSMD13-204	ENST00000525665	PGGHG	Q32M88	737 aa		13.55	□□□□□ -0.24
PSMD13-204	ENST00000525665	GPR139	Q6DWJ6	353 aa		13.55	□□□□□ -0.24
PSMD13-204	ENST00000525665	AAED1	Q7RTV5	226 aa		13.55	□□□□□ -0.24
PSMD13-204	ENST00000525665	HDDC2	Q7Z4H3	204 aa		13.55	□□□□□ -0.24
PSMD13-204	ENST00000525665	CNEP1R1	Q8N9A8	125 aa		13.55	□□□□□ -0.24
PSMD13-204	ENST00000525665	TXNDC15	Q96J42	360 aa		13.55	□□□□□ -0.24
PSMD13-204	ENST00000525665	TSPAN32	Q96QS1	320 aa		13.55	□□□□□ -0.24
PSMD13-204	ENST00000525665	EMC6	Q9BV81	110 aa		13.55	□□□□□ -0.24
PSMD13-204	ENST00000525665	ALPK2	Q86TB3	2170 aa		13.55	□□□□□ -0.24
PSMD13-204	ENST00000525665	PHF3	Q92576	2039 aa	Known RBP	13.55	□□□□□ -0.24
PSMD13-204	ENST00000525665	TEX13C	A0A0J9YWL9	993 aa		13.54	□□□□□ -0.24
PSMD13-204	ENST00000525665	SLC35F4	A4IF30	521 aa		13.54	□□□□□ -0.24
PSMD13-204	ENST00000525665	BHLHE40	O14503	412 aa		13.54	□□□□□ -0.24
PSMD13-204	ENST00000525665	MRPL33	O75394	65 aa	Known RBP	13.54	□□□□□ -0.24
PSMD13-204	ENST00000525665	TOX	O94900	526 aa		13.54	□□□□□ -0.24
PSMD13-204	ENST00000525665	CRH	P06850	196 aa		13.54	□□□□□ -0.24
PSMD13-204	ENST00000525665	APEH	P13798	732 aa	Known RBP	13.54	□□□□□ -0.24
PSMD13-204	ENST00000525665	EPHA2	P29317	976 aa		13.54	□□□□□ -0.24
PSMD13-204	ENST00000525665	SDHA	P31040	664 aa		13.54	□□□□□ -0.24
PSMD13-204	ENST00000525665	CEACAM8	P31997	349 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMD13-204	ENST00000525665	ACVR1B	P36896	505 aa		13.54	□□□□□ -0.24
PSMD13-204	ENST00000525665	MYBPC1	Q00872	1141 aa		13.54	□□□□□ -0.24
PSMD13-204	ENST00000525665	PTGES3	Q15185	160 aa	Known RBP	13.54	□□□□□ -0.24
PSMD13-204	ENST00000525665	TMEM236	Q5W0B7	351 aa		13.54	□□□□□ -0.24
PSMD13-204	ENST00000525665	FAM205BP	Q63HN1	556 aa		13.54	□□□□□ -0.24
PSMD13-204	ENST00000525665	NIPAL3	Q6P499	406 aa		13.54	□□□□□ -0.24
PSMD13-204	ENST00000525665	CASP12	Q6UXS9	341 aa		13.54	□□□□□ -0.24
PSMD13-204	ENST00000525665	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMD13-204	ENST00000525665	FAM214B	Q7L5A3	538 aa		13.54	□□□□□ -0.24
PSMD13-204	ENST00000525665	FJX1	Q86VR8	437 aa		13.54	□□□□□ -0.24
PSMD13-204	ENST00000525665	MARVELD2	Q8N4S9	558 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms