RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 RMND5AQ9H871 391 aa20.62■□□□□ 0.89
USP47-205ENST00000525257 LPAR2Q9HBW0 351 aa20.62■□□□□ 0.89
USP47-205ENST00000525257 IGKV1D-42A0A075B6H8 117 aa20.61■□□□□ 0.89
USP47-205ENST00000525257 HPRP00739 348 aa20.61■□□□□ 0.89
USP47-205ENST00000525257 HPXP02790 462 aa20.61■□□□□ 0.89
USP47-205ENST00000525257 ALDH3B1P43353 468 aa20.61■□□□□ 0.89
USP47-205ENST00000525257 GPR6P46095 362 aaPredicted RBP20.61■□□□□ 0.89
USP47-205ENST00000525257 EVX1P49640 407 aa20.61■□□□□ 0.89
USP47-205ENST00000525257 UEVLDQ8IX04 471 aa20.61■□□□□ 0.89
USP47-205ENST00000525257 C20orf196Q8IYI0 205 aa20.61■□□□□ 0.89
USP47-205ENST00000525257 CLDND2Q8NHS1 167 aa20.61■□□□□ 0.89
USP47-205ENST00000525257 C12orf10Q9HB07 376 aa20.61■□□□□ 0.89
USP47-205ENST00000525257 TRAV36DV7A0A075B6V5 113 aa20.6■□□□□ 0.89
USP47-205ENST00000525257 A0A1B0GWA3 101 aa20.6■□□□□ 0.89
USP47-205ENST00000525257 HLA-DOBP13765 273 aa20.6■□□□□ 0.89
USP47-205ENST00000525257 NQO1P15559 274 aaKnown RBP20.6■□□□□ 0.89
USP47-205ENST00000525257 ZNF14P17017 642 aaPredicted RBP20.6■□□□□ 0.89
USP47-205ENST00000525257 COL8A2P25067 703 aa20.6■□□□□ 0.89
USP47-205ENST00000525257 HTR2AP28223 471 aa20.6■□□□□ 0.89
USP47-205ENST00000525257 AQP5P55064 265 aa20.6■□□□□ 0.89
USP47-205ENST00000525257 MAD2L1BPQ15013 274 aaPredicted RBP20.6■□□□□ 0.89
USP47-205ENST00000525257 TRMT5Q32P41 509 aaKnown RBP20.6■□□□□ 0.89
USP47-205ENST00000525257 HHATQ5VTY9 493 aa20.6■□□□□ 0.89
USP47-205ENST00000525257 C5orf46Q6UWT4 87 aa20.6■□□□□ 0.89
USP47-205ENST00000525257 ZNF813Q6ZN06 617 aa20.6■□□□□ 0.89
USP47-205ENST00000525257 ANKRD42Q8N9B4 389 aa20.6■□□□□ 0.89
USP47-205ENST00000525257 SEMA6DQ8NFY4 1073 aa20.6■□□□□ 0.89
USP47-205ENST00000525257 OR9I1Q8NGQ6 314 aa20.6■□□□□ 0.89
USP47-205ENST00000525257 BBS10Q8TAM1 723 aa20.6■□□□□ 0.89
USP47-205ENST00000525257 MS4A5Q9H3V2 200 aa20.6■□□□□ 0.89
USP47-205ENST00000525257 BCL2L10Q9HD36 194 aa20.6■□□□□ 0.89
USP47-205ENST00000525257 A4GALTQ9NPC4 353 aa20.6■□□□□ 0.89
USP47-205ENST00000525257 HIF1ANQ9NWT6 349 aa20.6■□□□□ 0.89
USP47-205ENST00000525257 ZIM2Q9NZV7 527 aa20.6■□□□□ 0.89
USP47-205ENST00000525257 KLHL14Q9P2G3 628 aa20.6■□□□□ 0.89
USP47-205ENST00000525257 FZR1Q9UM11 496 aa20.6■□□□□ 0.89
USP47-205ENST00000525257 SPEF1Q9Y4P9 236 aa20.6■□□□□ 0.89
USP47-205ENST00000525257 NOX1Q9Y5S8 564 aa20.6■□□□□ 0.89
USP47-205ENST00000525257 LOC102725191A0A1B0GVB3 256 aa20.59■□□□□ 0.89
USP47-205ENST00000525257 FAM157AC9JC47 383 aa20.59■□□□□ 0.89
USP47-205ENST00000525257 MS4A18H0YCH9 400 aa20.59■□□□□ 0.89
USP47-205ENST00000525257 SAGP10523 405 aaPredicted RBP20.59■□□□□ 0.89
USP47-205ENST00000525257 ZNF35P13682 527 aa20.59■□□□□ 0.89
USP47-205ENST00000525257 B4GALT1P15291 398 aa20.59■□□□□ 0.89
USP47-205ENST00000525257 PTDSS1P48651 473 aaKnown RBP20.59■□□□□ 0.89
USP47-205ENST00000525257 SEC24CP53992 1094 aa20.59■□□□□ 0.89
USP47-205ENST00000525257 RGNQ15493 299 aa20.59■□□□□ 0.89
USP47-205ENST00000525257 MS4A18Q3C1V0 323 aa20.59■□□□□ 0.89
USP47-205ENST00000525257 SLC9B1Q4ZJI4 515 aa20.59■□□□□ 0.89
USP47-205ENST00000525257 ALG10BQ5I7T1 473 aa20.59■□□□□ 0.89
USP47-205ENST00000525257 MSANTD1Q6ZTZ1 278 aa20.59■□□□□ 0.89
USP47-205ENST00000525257 NET1Q7Z628 596 aaPredicted RBP20.59■□□□□ 0.89
USP47-205ENST00000525257 LRP11Q86VZ4 500 aa20.59■□□□□ 0.89
USP47-205ENST00000525257 MREGQ8N565 214 aa20.59■□□□□ 0.89
USP47-205ENST00000525257 ADPRHL1Q8NDY3 354 aa20.59■□□□□ 0.89
USP47-205ENST00000525257 RNF217Q8TC41 542 aa20.59■□□□□ 0.89
USP47-205ENST00000525257 TMEM186Q96B77 213 aa20.59■□□□□ 0.89
USP47-205ENST00000525257 ZNF75AQ96N20 296 aa20.59■□□□□ 0.89
USP47-205ENST00000525257 RSPO3Q9BXY4 272 aaPredicted RBP20.59■□□□□ 0.89
USP47-205ENST00000525257 B3GAT2Q9NPZ5 323 aa20.59■□□□□ 0.89
USP47-205ENST00000525257 MED29Q9NX70 200 aa20.59■□□□□ 0.89
USP47-205ENST00000525257 MYEF2Q9P2K5 600 aaKnown RBP20.59■□□□□ 0.89
USP47-205ENST00000525257 POFUT2Q9Y2G5 429 aa20.59■□□□□ 0.89
USP47-205ENST00000525257 A0A0A6YYJ9 748 aa20.58■□□□□ 0.89
USP47-205ENST00000525257 C5orf58C9J3I9 102 aa20.58■□□□□ 0.89
USP47-205ENST00000525257 SLCO1B7G3V0H7 640 aa20.58■□□□□ 0.89
USP47-205ENST00000525257 WNT9BO14905 357 aa20.58■□□□□ 0.89
USP47-205ENST00000525257 RGS9O75916 674 aaPredicted RBP20.58■□□□□ 0.89
USP47-205ENST00000525257 GLRXP35754 106 aa20.58■□□□□ 0.89
USP47-205ENST00000525257 POLR2JP52435 117 aaKnown RBP20.58■□□□□ 0.89
USP47-205ENST00000525257 MFSD13AQ14CX5 517 aa20.58■□□□□ 0.89
USP47-205ENST00000525257 GKAP1Q5VSY0 366 aaPredicted RBP20.58■□□□□ 0.89
USP47-205ENST00000525257 WDR93Q6P2C0 686 aa20.58■□□□□ 0.89
USP47-205ENST00000525257 COMTD1Q86VU5 262 aa20.58■□□□□ 0.89
USP47-205ENST00000525257 WDFY1Q8IWB7 410 aa20.58■□□□□ 0.89
USP47-205ENST00000525257 LSMEM1Q8N8F7 131 aa20.58■□□□□ 0.89
USP47-205ENST00000525257 RDH5Q92781 318 aa20.58■□□□□ 0.89
USP47-205ENST00000525257 TXNDC15Q96J42 360 aa20.58■□□□□ 0.89
USP47-205ENST00000525257 THAP1Q9NVV9 213 aa20.58■□□□□ 0.89
USP47-205ENST00000525257 TREM2Q9NZC2 230 aa20.58■□□□□ 0.89
USP47-205ENST00000525257 DYSFO75923 2080 aa20.57■□□□□ 0.88
USP47-205ENST00000525257 A0A087WUJ7 227 aa20.57■□□□□ 0.88
USP47-205ENST00000525257 MSMBP08118 114 aa20.57■□□□□ 0.88
USP47-205ENST00000525257 ACHEP22303 614 aa20.57■□□□□ 0.88
USP47-205ENST00000525257 PRKAR1BP31321 381 aa20.57■□□□□ 0.88
USP47-205ENST00000525257 GIPRP48546 466 aa20.57■□□□□ 0.88
USP47-205ENST00000525257 GALK2Q01415 458 aa20.57■□□□□ 0.88
USP47-205ENST00000525257 CAMK2DQ13557 499 aa20.57■□□□□ 0.88
USP47-205ENST00000525257 SHQ1Q6PI26 577 aaKnown RBP20.57■□□□□ 0.88
USP47-205ENST00000525257 THSD4Q6ZMP0 1018 aa20.57■□□□□ 0.88
USP47-205ENST00000525257 DEF8Q6ZN54 512 aa20.57■□□□□ 0.88
USP47-205ENST00000525257 DNAJA4Q8WW22 397 aaPredicted RBP20.57■□□□□ 0.88
USP47-205ENST00000525257 YIPF5Q969M3 257 aa20.57■□□□□ 0.88
USP47-205ENST00000525257 MAELQ96JY0 434 aaKnown RBP20.57■□□□□ 0.88
USP47-205ENST00000525257 LRR1Q96L50 414 aa20.57■□□□□ 0.88
USP47-205ENST00000525257 ULBP2Q9BZM5 246 aa20.57■□□□□ 0.88
USP47-205ENST00000525257 PAIP1Q9H074 479 aaKnown RBP20.57■□□□□ 0.88
USP47-205ENST00000525257 RACGAP1Q9H0H5 632 aa20.57■□□□□ 0.88
USP47-205ENST00000525257 SDR39U1Q9NRG7 319 aaPredicted RBP20.57■□□□□ 0.88
USP47-205ENST00000525257 ZNF275Q9NSD4 429 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms