RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 GMFGO60234 142 aa2.52□□□□□ -2.01
CD44-215ENST00000525241 B4GALT2O60909 372 aa2.52□□□□□ -2.01
CD44-215ENST00000525241 MED6O75586 246 aa2.52□□□□□ -2.01
CD44-215ENST00000525241 SPAG6O75602 509 aa2.52□□□□□ -2.01
CD44-215ENST00000525241 RETP07949 1114 aa2.52□□□□□ -2.01
CD44-215ENST00000525241 IGHV3-43DP0DP04 118 aa2.52□□□□□ -2.01
CD44-215ENST00000525241 ATP1B3P54709 279 aa2.52□□□□□ -2.01
CD44-215ENST00000525241 ERVK-25P63136 954 aa2.52□□□□□ -2.01
CD44-215ENST00000525241 FGL1Q08830 312 aa2.52□□□□□ -2.01
CD44-215ENST00000525241 SLAQ13239 276 aa2.52□□□□□ -2.01
CD44-215ENST00000525241 DGUOKQ16854 277 aa2.52□□□□□ -2.01
CD44-215ENST00000525241 LYPD2Q6UXB3 125 aa2.52□□□□□ -2.01
CD44-215ENST00000525241 GET4Q7L5D6 327 aaPredicted RBP2.52□□□□□ -2.01
CD44-215ENST00000525241 PLA2G4DQ86XP0 818 aa2.52□□□□□ -2.01
CD44-215ENST00000525241 PCP2Q8IVA1 136 aa2.52□□□□□ -2.01
CD44-215ENST00000525241 NUDCD3Q8IVD9 361 aa2.52□□□□□ -2.01
CD44-215ENST00000525241 TPRX1Q8N7U7 411 aa2.52□□□□□ -2.01
CD44-215ENST00000525241 SMARCD2Q92925 531 aa2.52□□□□□ -2.01
CD44-215ENST00000525241 FOPNLQ96NB1 174 aa2.52□□□□□ -2.01
CD44-215ENST00000525241 NPAS2Q99743 824 aa2.52□□□□□ -2.01
CD44-215ENST00000525241 IFI27L2Q9H2X8 130 aa2.52□□□□□ -2.01
CD44-215ENST00000525241 ADAM28Q9UKQ2 775 aa2.52□□□□□ -2.01
CD44-215ENST00000525241 CDH9Q9ULB4 789 aa2.52□□□□□ -2.01
CD44-215ENST00000525241 F11RQ9Y624 299 aaKnown RBP2.52□□□□□ -2.01
CD44-215ENST00000525241 SPRR5A0A1B0GTR4 108 aa2.51□□□□□ -2.01
CD44-215ENST00000525241 PLAC8L1A1L4L8 177 aa2.51□□□□□ -2.01
CD44-215ENST00000525241 H0YCG3 227 aa2.51□□□□□ -2.01
CD44-215ENST00000525241 TOM1O60784 492 aa2.51□□□□□ -2.01
CD44-215ENST00000525241 GKN3PP0CG01 181 aa2.51□□□□□ -2.01
CD44-215ENST00000525241 DBTP11182 482 aaKnown RBP2.51□□□□□ -2.01
CD44-215ENST00000525241 IGFBP3P17936 291 aaPredicted RBP2.51□□□□□ -2.01
CD44-215ENST00000525241 MAGEA8P43361 318 aa2.51□□□□□ -2.01
CD44-215ENST00000525241 NPBWR2P48146 333 aa2.51□□□□□ -2.01
CD44-215ENST00000525241 IFNAR2P48551 515 aa2.51□□□□□ -2.01
CD44-215ENST00000525241 MNAT1P51948 309 aa2.51□□□□□ -2.01
CD44-215ENST00000525241 PDK3Q15120 406 aa2.51□□□□□ -2.01
CD44-215ENST00000525241 TAF7Q15545 349 aaPredicted RBP2.51□□□□□ -2.01
CD44-215ENST00000525241 GALNT17Q6IS24 598 aa2.51□□□□□ -2.01
CD44-215ENST00000525241 ENPP6Q6UWR7 440 aa2.51□□□□□ -2.01
CD44-215ENST00000525241 TRPV1Q8NER1 839 aa2.51□□□□□ -2.01
CD44-215ENST00000525241 OR52M1Q8NGK5 317 aa2.51□□□□□ -2.01
CD44-215ENST00000525241 PYROXD1Q8WU10 500 aa2.51□□□□□ -2.01
CD44-215ENST00000525241 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.51□□□□□ -2.01
CD44-215ENST00000525241 C10orf35Q96D05 121 aa2.51□□□□□ -2.01
CD44-215ENST00000525241 AURKBQ96GD4 344 aaPredicted RBP2.51□□□□□ -2.01
CD44-215ENST00000525241 RPRD1AQ96P16 312 aaPredicted RBP2.51□□□□□ -2.01
CD44-215ENST00000525241 COPS8Q99627 209 aa2.51□□□□□ -2.01
CD44-215ENST00000525241 GORASP2Q9H8Y8 452 aa2.51□□□□□ -2.01
CD44-215ENST00000525241 NTN4Q9HB63 628 aa2.51□□□□□ -2.01
CD44-215ENST00000525241 SLCO1B3Q9NPD5 702 aa2.51□□□□□ -2.01
CD44-215ENST00000525241 CTPS2Q9NRF8 586 aa2.51□□□□□ -2.01
CD44-215ENST00000525241 MYO10Q9HD67 2058 aa2.5□□□□□ -2.01
CD44-215ENST00000525241 C15orf38-AP3S2A0A0A6YYH1 394 aa2.5□□□□□ -2.01
CD44-215ENST00000525241 TCP11X1B4DZS4 312 aa2.5□□□□□ -2.01
CD44-215ENST00000525241 ANGPTL7O43827 346 aa2.5□□□□□ -2.01
CD44-215ENST00000525241 FCMRO60667 390 aa2.5□□□□□ -2.01
CD44-215ENST00000525241 SPAG7O75391 227 aa2.5□□□□□ -2.01
CD44-215ENST00000525241 CLDN9O95484 217 aa2.5□□□□□ -2.01
CD44-215ENST00000525241 CSF3P09919 207 aa2.5□□□□□ -2.01
CD44-215ENST00000525241 ZNF823P16415 610 aa2.5□□□□□ -2.01
CD44-215ENST00000525241 CNR1P21554 472 aa2.5□□□□□ -2.01
CD44-215ENST00000525241 HMGCS1Q01581 520 aa2.5□□□□□ -2.01
CD44-215ENST00000525241 ENPEPQ07075 957 aa2.5□□□□□ -2.01
CD44-215ENST00000525241 NCBP1Q09161 790 aaKnown RBP2.5□□□□□ -2.01
CD44-215ENST00000525241 SCRN3Q0VDG4 424 aa2.5□□□□□ -2.01
CD44-215ENST00000525241 SMARCB1Q12824 385 aa2.5□□□□□ -2.01
CD44-215ENST00000525241 GNMTQ14749 295 aa2.5□□□□□ -2.01
CD44-215ENST00000525241 FAM83EQ2M2I3 478 aa2.5□□□□□ -2.01
CD44-215ENST00000525241 UTS2BQ765I0 119 aa2.5□□□□□ -2.01
CD44-215ENST00000525241 OR10G2Q8NGC3 310 aa2.5□□□□□ -2.01
CD44-215ENST00000525241 ACTRT1Q8TDG2 376 aa2.5□□□□□ -2.01
CD44-215ENST00000525241 DNAJC19Q96DA6 116 aa2.5□□□□□ -2.01
CD44-215ENST00000525241 ZNF641Q96N77 438 aaPredicted RBP2.5□□□□□ -2.01
CD44-215ENST00000525241 MS4A4EQ96PG1 132 aa2.5□□□□□ -2.01
CD44-215ENST00000525241 ECSITQ9BQ95 431 aa2.5□□□□□ -2.01
CD44-215ENST00000525241 NIPAL2Q9H841 368 aa2.5□□□□□ -2.01
CD44-215ENST00000525241 MCCC2Q9HCC0 563 aa2.5□□□□□ -2.01
CD44-215ENST00000525241 EXD2Q9NVH0 621 aa2.5□□□□□ -2.01
CD44-215ENST00000525241 CARMIL3Q8ND23 1372 aa2.49□□□□□ -2.01
CD44-215ENST00000525241 SLIT3O75094 1523 aa2.49□□□□□ -2.01
CD44-215ENST00000525241 IGLV4-60A0A075B6I1 120 aa2.49□□□□□ -2.01
CD44-215ENST00000525241 IGKV1D-13A0A0B4J2D9 117 aa2.49□□□□□ -2.01
CD44-215ENST00000525241 PRSS37A4D1T9 235 aa2.49□□□□□ -2.01
CD44-215ENST00000525241 ZNF208O43345 1280 aa2.49□□□□□ -2.01
CD44-215ENST00000525241 UPK3AO75631 287 aa2.49□□□□□ -2.01
CD44-215ENST00000525241 IGKV1-13P0DP09 117 aa2.49□□□□□ -2.01
CD44-215ENST00000525241 ZNF30P17039 623 aa2.49□□□□□ -2.01
CD44-215ENST00000525241 GLRA2P23416 452 aa2.49□□□□□ -2.01
CD44-215ENST00000525241 FDFT1P37268 417 aa2.49□□□□□ -2.01
CD44-215ENST00000525241 PMELP40967 661 aa2.49□□□□□ -2.01
CD44-215ENST00000525241 UBE2HP62256 183 aa2.49□□□□□ -2.01
CD44-215ENST00000525241 IRX3P78415 501 aaPredicted RBP2.49□□□□□ -2.01
CD44-215ENST00000525241 COA6Q5JTJ3 125 aaKnown RBP2.49□□□□□ -2.01
CD44-215ENST00000525241 CNIH2Q6PI25 160 aa2.49□□□□□ -2.01
CD44-215ENST00000525241 UQCC3Q6UW78 93 aa2.49□□□□□ -2.01
CD44-215ENST00000525241 ZNF695Q8IW36 515 aa2.49□□□□□ -2.01
CD44-215ENST00000525241 CYB561D1Q8N8Q1 229 aa2.49□□□□□ -2.01
CD44-215ENST00000525241 FAM83FQ8NEG4 500 aaPredicted RBP2.49□□□□□ -2.01
CD44-215ENST00000525241 SLC22A8Q8TCC7 542 aa2.49□□□□□ -2.01
CD44-215ENST00000525241 CD300LFQ8TDQ1 290 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms