RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, human

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BEST1-204	ENST00000524926	KDM8	Q8N371	416 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	DDIT4L	Q96D03	193 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	PELI1	Q96FA3	418 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	MRPL48	Q96GC5	212 aa	Known RBP	13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	NCDN	Q9UBB6	729 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	SHISA3	A0PJX4	238 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	TVP23A	A6NH52	213 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	MASP2	O00187	686 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	UPK1B	O75841	260 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	DKK1	O94907	266 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	TRIM16L	Q309B1	348 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	NDUFAF7	Q7L592	441 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	ZNF248	Q8NDW4	579 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	GHSR	Q92847	366 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	COX4I2	Q96KJ9	171 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	TAAR9	Q96RI9	348 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	CDCP1	Q9H5V8	836 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	CMAHP	Q9Y471	501 aa		13.79	□□□□□ -0.2
BEST1-204	ENST00000524926	FTCDNL1	E5RQL4	147 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	LOC110117498-PIK3R3	F6TDL0	507 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	PFDN1	O60925	122 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	NCR1	O76036	304 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	CD53	P19397	219 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	OTX2	P32243	289 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	DMKN	Q6E0U4	476 aa	Predicted RBP	13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	OPN5	Q6U736	354 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	SLC16A9	Q7RTY1	509 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	ABHD4	Q8TB40	342 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	ASB15	Q8WXK1	588 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	AP3S1	Q92572	193 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	NXPE2	Q96DL1	559 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	ADAD1	Q96M93	576 aa	Known RBP	13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	ABCB9	Q9NP78	766 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	ACOXL	Q9NUZ1	547 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	MRPL39	Q9NYK5	338 aa	Known RBP	13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	FBXL2	Q9UKC9	423 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	13.78	□□□□□ -0.2
BEST1-204	ENST00000524926		A0A1W2PRG6	482 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	SLC35F4	A4IF30	521 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	TRIM3	O75382	744 aa	Predicted RBP	13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	CD63	P08962	238 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	ETV6	P41212	452 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	SIRPA	P78324	504 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	TRAM1	Q15629	374 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	PLPPR5	Q32ZL2	321 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	GLYR1	Q49A26	553 aa	Predicted RBP	13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	TIPARP	Q7Z3E1	657 aa	Known RBP	13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	CEACAM19	Q7Z692	300 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	MRGPRX4	Q96LA9	322 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	PGLYRP3	Q96LB9	341 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	ZPBP	Q9BS86	351 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	TXNIP	Q9H3M7	391 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	ST6GALNAC2	Q9UJ37	374 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	TCFL5	Q9UL49	500 aa		13.78	□□□□□ -0.2
BEST1-204	ENST00000524926	COL27A1	Q8IZC6	1860 aa	Predicted RBP	13.77	□□□□□ -0.2
BEST1-204	ENST00000524926	IGLV3-32	A0A0A0MS00	114 aa		13.77	□□□□□ -0.21
BEST1-204	ENST00000524926	ZNF208	O43345	1280 aa		13.77	□□□□□ -0.21
BEST1-204	ENST00000524926	GAA	P10253	952 aa		13.77	□□□□□ -0.21
BEST1-204	ENST00000524926	PSMB10	P40306	273 aa		13.77	□□□□□ -0.21
BEST1-204	ENST00000524926	CENPA	P49450	140 aa		13.77	□□□□□ -0.21
BEST1-204	ENST00000524926	PSMD7	P51665	324 aa		13.77	□□□□□ -0.21
BEST1-204	ENST00000524926	HSF2	Q03933	536 aa		13.77	□□□□□ -0.21
BEST1-204	ENST00000524926	MELK	Q14680	651 aa		13.77	□□□□□ -0.21
BEST1-204	ENST00000524926	EEF1A1P5	Q5VTE0	462 aa		13.77	□□□□□ -0.21
BEST1-204	ENST00000524926	PLEKHG7	Q6ZR37	379 aa		13.77	□□□□□ -0.21
BEST1-204	ENST00000524926	FAM83F	Q8NEG4	500 aa	Predicted RBP	13.77	□□□□□ -0.21
BEST1-204	ENST00000524926	OR2M3	Q8NG83	312 aa		13.77	□□□□□ -0.21
BEST1-204	ENST00000524926	OR4K17	Q8NGC6	315 aa		13.77	□□□□□ -0.21
BEST1-204	ENST00000524926	OR5M1	Q8NGP8	315 aa		13.77	□□□□□ -0.21
BEST1-204	ENST00000524926	MFSD8	Q8NHS3	518 aa		13.77	□□□□□ -0.21
BEST1-204	ENST00000524926	POLE4	Q9NR33	117 aa		13.77	□□□□□ -0.21
BEST1-204	ENST00000524926	TRBV2	A0A0J9YWF9	115 aa		13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	PRSS37	A4D1T9	235 aa		13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	CBFA2T3	O75081	653 aa		13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	SNX4	O95219	450 aa		13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	GPANK1	O95872	356 aa		13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	IGHE	P01854	428 aa		13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	HLA-DQA2	P01906	255 aa		13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	OPN1LW	P04000	364 aa		13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	HLA-DOB	P13765	273 aa		13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	EDNRA	P25101	427 aa		13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	PUDP	Q08623	228 aa		13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	DNASE1L3	Q13609	305 aa		13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	MFSD13A	Q14CX5	517 aa		13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	ZNF181	Q2M3W8	571 aa		13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	FAM27D1	Q5T7N8	215 aa		13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	RPS19BP1	Q86WX3	136 aa	Known RBP	13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	TIGD4	Q8IY51	512 aa		13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	MS4A15	Q8N5U1	240 aa		13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	TMEM156	Q8N614	296 aa		13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	WDSUB1	Q8N9V3	476 aa		13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	OR6N2	Q8NGY6	317 aa		13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	CT55	Q8WUE5	264 aa		13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	EDEM2	Q9BV94	578 aa		13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	MRO	Q9BYG7	248 aa		13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	PPIL3	Q9H2H8	161 aa	Known RBP	13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	PTGES2	Q9H7Z7	377 aa		13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	SERINC1	Q9NRX5	453 aa		13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	COMMD3	Q9UBI1	195 aa		13.76	□□□□□ -0.21
BEST1-204	ENST00000524926	CPAMD8	Q8IZJ3	1885 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms