RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 ADGRE4PQ86SQ3 457 aa14.12□□□□□ -0.15
TSPAN4-213ENST00000524895 DEPDC4Q8N2C3 294 aa14.12□□□□□ -0.15
TSPAN4-213ENST00000524895 SETD9Q8NE22 299 aa14.12□□□□□ -0.15
TSPAN4-213ENST00000524895 ABHD3Q8WU67 409 aa14.12□□□□□ -0.15
TSPAN4-213ENST00000524895 PLEKHA8Q96JA3 519 aa14.12□□□□□ -0.15
TSPAN4-213ENST00000524895 TXNIPQ9H3M7 391 aa14.12□□□□□ -0.15
TSPAN4-213ENST00000524895 TVP23BQ9NYZ1 205 aa14.12□□□□□ -0.15
TSPAN4-213ENST00000524895 EMC3Q9P0I2 261 aa14.12□□□□□ -0.15
TSPAN4-213ENST00000524895 CLCF1Q9UBD9 225 aa14.12□□□□□ -0.15
TSPAN4-213ENST00000524895 EPG5Q9HCE0 2579 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 RIIAD1A6NNX1 92 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 ZNF716A6NP11 495 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 E9PQ18 207 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 XKRYO14609 159 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 IMPA2O14732 288 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 AKAP8O43823 692 aaKnown RBP14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 IDH3BO43837 385 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 TGM6O95932 706 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 BCL10O95999 233 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 IFNGP01579 166 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 GNAO1P09471 354 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 SLC16A1P53985 500 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 RPL27P61353 136 aaKnown RBP14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 KRR1Q13601 381 aaKnown RBP14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 PDK3Q15120 406 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 SNAPC1Q16533 368 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 C1orf185Q5T7R7 199 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 ZNF691Q5VV52 312 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 FAM205BPQ63HN1 556 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 GTF2IRD2BQ6EKJ0 949 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 RPTNQ6XPR3 784 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 CREB3L2Q70SY1 520 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 FAM122BQ7Z309 247 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 HDDC2Q7Z4H3 204 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 GTF2IRD2Q86UP8 949 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 JAZF1Q86VZ6 243 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 ST6GALNAC3Q8NDV1 305 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 RASD2Q96D21 266 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 Q96M85 177 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 TP63Q9H3D4 680 aaPredicted RBP14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 MED29Q9NX70 200 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 ZNF346Q9UL40 294 aaKnown RBP14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 DNAJC13O75165 2243 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 IGSF10Q6WRI0 2623 aa14.11□□□□□ -0.15
TSPAN4-213ENST00000524895 SPTA1P02549 2419 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 A6NIZ1 184 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 CD8B2A6NJW9 211 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 M0R129 80 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 GPR171O14626 319 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 SURF4O15260 269 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 TXNDC12O95881 172 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 HOXD4P09016 255 aaPredicted RBP14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 ZNF3P17036 446 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 ACVR2AP27037 513 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 ACVR1BP36896 505 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 PCYT1AP49585 367 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 BIDP55957 195 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 CLDN17P56750 224 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 RAP1BP61224 184 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 RAP1AP62834 184 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 IL5RAQ01344 420 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 NSUN5P2Q63ZY6 315 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 CCDC71Q8IV32 467 aaPredicted RBP14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 C8orf59Q8N0T1 100 aaPredicted RBP14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 ARIH2OSQ8N7S6 290 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 OR4K13Q8NH42 304 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 ASB10Q8WXI3 467 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 WNT2BQ93097 391 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 TXNDC15Q96J42 360 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 MUS81Q96NY9 551 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 ANKRD60Q9BZ19 345 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 RNF122Q9H9V4 155 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 CALHM2Q9HA72 323 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 CMC2Q9NRP2 79 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 KLHL21Q9UJP4 597 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 ZNF835Q9Y2P0 537 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 FLVCR1Q9Y5Y0 555 aa14.1□□□□□ -0.15
TSPAN4-213ENST00000524895 IGKV3D-15A0A087WSY6 115 aa14.09□□□□□ -0.15
TSPAN4-213ENST00000524895 ZNF726A6NNF4 738 aa14.09□□□□□ -0.15
TSPAN4-213ENST00000524895 KDM4EB2RXH2 506 aaPredicted RBP14.09□□□□□ -0.15
TSPAN4-213ENST00000524895 SLC2A10O95528 541 aa14.09□□□□□ -0.15
TSPAN4-213ENST00000524895 HIST1H1CP16403 213 aaKnown RBP14.09□□□□□ -0.15
TSPAN4-213ENST00000524895 MESTQ5EB52 335 aa14.09□□□□□ -0.15
TSPAN4-213ENST00000524895 ARMC4Q5T2S8 1044 aa14.09□□□□□ -0.15
TSPAN4-213ENST00000524895 OR2A2Q6IF42 318 aa14.09□□□□□ -0.15
TSPAN4-213ENST00000524895 PTCHD4Q6ZW05 846 aa14.09□□□□□ -0.15
TSPAN4-213ENST00000524895 USP51Q70EK9 711 aa14.09□□□□□ -0.15
TSPAN4-213ENST00000524895 ADCK1Q86TW2 530 aa14.09□□□□□ -0.15
TSPAN4-213ENST00000524895 TCEANCQ8N8B7 351 aa14.09□□□□□ -0.15
TSPAN4-213ENST00000524895 SDR9C7Q8NEX9 313 aa14.09□□□□□ -0.15
TSPAN4-213ENST00000524895 OR52E2Q8NGJ4 325 aa14.09□□□□□ -0.15
TSPAN4-213ENST00000524895 ZNF519Q8TB69 540 aa14.09□□□□□ -0.15
TSPAN4-213ENST00000524895 ZNF775Q96BV0 537 aaPredicted RBP14.09□□□□□ -0.15
TSPAN4-213ENST00000524895 CNBD2Q96M20 576 aa14.09□□□□□ -0.15
TSPAN4-213ENST00000524895 ADAD1Q96M93 576 aaKnown RBP14.09□□□□□ -0.15
TSPAN4-213ENST00000524895 ZNF385AQ96PM9 386 aaKnown RBP14.09□□□□□ -0.15
TSPAN4-213ENST00000524895 TM9SF2Q99805 663 aa14.09□□□□□ -0.15
TSPAN4-213ENST00000524895 EMC6Q9BV81 110 aa14.09□□□□□ -0.15
TSPAN4-213ENST00000524895 CLEC4AQ9UMR7 237 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms