RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 RNF130Q86XS8 419 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 RIMKLAQ8IXN7 391 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 KIR3DL3Q8N743 410 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 ST7LQ8TDW4 575 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 MZB1Q8WU39 189 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 CCL17Q92583 94 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 TIMD4Q96H15 378 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 SLC35A5Q9BS91 424 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 MECRQ9BV79 373 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 HINT3Q9NQE9 182 aaKnown RBP9.91□□□□□ -0.82
SDCBP-211ENST00000523441 POLE3Q9NRF9 147 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 ARMCX1Q9P291 453 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 ZNF346Q9UL40 294 aaKnown RBP9.91□□□□□ -0.82
SDCBP-211ENST00000523441 POFUT2Q9Y2G5 429 aa9.91□□□□□ -0.82
SDCBP-211ENST00000523441 AGAP5A6NIR3 686 aa9.9□□□□□ -0.82
SDCBP-211ENST00000523441 POM121CA8CG34 1229 aa9.9□□□□□ -0.82
SDCBP-211ENST00000523441 C17orf100A8MU93 164 aa9.9□□□□□ -0.82
SDCBP-211ENST00000523441 HMGN4O00479 90 aa9.9□□□□□ -0.82
SDCBP-211ENST00000523441 TFPTP0C1Z6 253 aa9.9□□□□□ -0.82
SDCBP-211ENST00000523441 NR2F1P10589 423 aa9.9□□□□□ -0.82
SDCBP-211ENST00000523441 ZNF14P17017 642 aaPredicted RBP9.9□□□□□ -0.82
SDCBP-211ENST00000523441 RAB1AP62820 205 aa9.9□□□□□ -0.82
SDCBP-211ENST00000523441 HOXC5Q00444 222 aa9.9□□□□□ -0.82
SDCBP-211ENST00000523441 POU3F1Q03052 451 aaPredicted RBP9.9□□□□□ -0.82
SDCBP-211ENST00000523441 HFEQ30201 348 aa9.9□□□□□ -0.82
SDCBP-211ENST00000523441 WBP2NLQ6ICG8 309 aa9.9□□□□□ -0.82
SDCBP-211ENST00000523441 BRICD5Q6PL45 260 aa9.9□□□□□ -0.82
SDCBP-211ENST00000523441 ZNF836Q6ZNA1 936 aa9.9□□□□□ -0.82
SDCBP-211ENST00000523441 DOK3Q7L591 496 aa9.9□□□□□ -0.82
SDCBP-211ENST00000523441 NOA1Q8NC60 698 aaKnown RBP9.9□□□□□ -0.82
SDCBP-211ENST00000523441 GLB1L3Q8NCI6 653 aaPredicted RBP9.9□□□□□ -0.82
SDCBP-211ENST00000523441 PIK3C3Q8NEB9 887 aa9.9□□□□□ -0.82
SDCBP-211ENST00000523441 RAB1CQ92928 201 aa9.9□□□□□ -0.82
SDCBP-211ENST00000523441 UBE2FQ969M7 185 aa9.9□□□□□ -0.82
SDCBP-211ENST00000523441 TMIGD2Q96BF3 282 aa9.9□□□□□ -0.82
SDCBP-211ENST00000523441 KTI12Q96EK9 354 aaPredicted RBP9.9□□□□□ -0.82
SDCBP-211ENST00000523441 OR2M2Q96R28 347 aa9.9□□□□□ -0.82
SDCBP-211ENST00000523441 DCLRE1CQ96SD1 692 aaKnown RBP9.9□□□□□ -0.82
SDCBP-211ENST00000523441 MS4A7Q9GZW8 240 aaPredicted RBP9.9□□□□□ -0.82
SDCBP-211ENST00000523441 SLC38A1Q9H2H9 487 aa9.9□□□□□ -0.82
SDCBP-211ENST00000523441 PIF1Q9H611 641 aa9.9□□□□□ -0.82
SDCBP-211ENST00000523441 ZNF385DQ9H6B1 395 aa9.9□□□□□ -0.82
SDCBP-211ENST00000523441 MMP26Q9NRE1 261 aa9.9□□□□□ -0.82
SDCBP-211ENST00000523441 B3GNT2Q9NY97 397 aa9.9□□□□□ -0.82
SDCBP-211ENST00000523441 NUP50Q9UKX7 468 aa9.9□□□□□ -0.82
SDCBP-211ENST00000523441 MDFIC2A0A1B0GVS7 189 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 RPL36A-HNRNPH2H7BZ11 118 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 M0R082 166 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 SPRY3O43610 288 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 ZNF500O60304 480 aaPredicted RBP9.89□□□□□ -0.83
SDCBP-211ENST00000523441 TRIM13O60858 407 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 KNG1P01042 644 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 FSHBP01225 129 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 DBIP07108 87 aaKnown RBP9.89□□□□□ -0.83
SDCBP-211ENST00000523441 RNASE1P07998 156 aaKnown RBP9.89□□□□□ -0.83
SDCBP-211ENST00000523441 ABHD2P08910 425 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 MAKP20794 623 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 DRD4P21917 467 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 ALDH3A1P30838 453 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 NME5P56597 212 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 KLF3P57682 345 aaPredicted RBP9.89□□□□□ -0.83
SDCBP-211ENST00000523441 SELENOVP59797 346 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 CAMK2DQ13557 499 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 MFSD13AQ14CX5 517 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 SLC9A3R2Q15599 337 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 FXNQ16595 210 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 GSTA3Q16772 222 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 XKR7Q5GH72 579 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 SAXO2Q658L1 398 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 ZNF572Q7Z3I7 529 aaPredicted RBP9.89□□□□□ -0.83
SDCBP-211ENST00000523441 CMIPQ8IY22 773 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 ZNF417Q8TAU3 575 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 SYNPRQ8TBG9 265 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 MIPOL1Q8TD10 442 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 OXGR1Q96P68 337 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 ZNF587Q96SQ5 575 aaPredicted RBP9.89□□□□□ -0.83
SDCBP-211ENST00000523441 SAP30LQ9HAJ7 183 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 RCE1Q9Y256 329 aa9.89□□□□□ -0.83
SDCBP-211ENST00000523441 WNK1Q9H4A3 2382 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 RNASET2O00584 256 aaKnown RBP9.88□□□□□ -0.83
SDCBP-211ENST00000523441 OR8G3PP0DMU2 310 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 HLA-DOBP13765 273 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 NQO1P15559 274 aaKnown RBP9.88□□□□□ -0.83
SDCBP-211ENST00000523441 KRT4P19013 534 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 GRPRP30550 384 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 CRHR1P34998 444 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 ACAA2P42765 397 aaKnown RBP9.88□□□□□ -0.83
SDCBP-211ENST00000523441 CRYBB2P43320 205 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 ATP4BP51164 291 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 MAP2K6P52564 334 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 CLDN8P56748 225 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 MRPS11P82912 194 aaKnown RBP9.88□□□□□ -0.83
SDCBP-211ENST00000523441 TEKQ02763 1124 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 RBBP4Q09028 425 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 RPS26P11Q5JNZ5 115 aaPredicted RBP9.88□□□□□ -0.83
SDCBP-211ENST00000523441 KLF17Q5JT82 389 aaPredicted RBP9.88□□□□□ -0.83
SDCBP-211ENST00000523441 COX20Q5RI15 118 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 RNF165Q6ZSG1 346 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 CCDC36Q8IYA8 594 aa9.88□□□□□ -0.83
SDCBP-211ENST00000523441 PEX5LQ8IYB4 626 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms