RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 FAM157BP0CG42 384 aa11.65□□□□□ -0.54
NKX3-1-202ENST00000523261 OR8G3PP0DMU2 310 aa11.65□□□□□ -0.54
NKX3-1-202ENST00000523261 LAMP1P11279 417 aa11.65□□□□□ -0.54
NKX3-1-202ENST00000523261 LSP1P33241 339 aa11.65□□□□□ -0.54
NKX3-1-202ENST00000523261 PRKAA2P54646 552 aa11.65□□□□□ -0.54
NKX3-1-202ENST00000523261 ERVS71-1P61550 626 aa11.65□□□□□ -0.54
NKX3-1-202ENST00000523261 KCNJ10P78508 379 aa11.65□□□□□ -0.54
NKX3-1-202ENST00000523261 PAX2Q02962 417 aa11.65□□□□□ -0.54
NKX3-1-202ENST00000523261 HNRNPA0Q13151 305 aaKnown RBP11.65□□□□□ -0.54
NKX3-1-202ENST00000523261 RAB39AQ14964 217 aa11.65□□□□□ -0.54
NKX3-1-202ENST00000523261 FAM209AQ5JX71 171 aa11.65□□□□□ -0.54
NKX3-1-202ENST00000523261 TYW3Q6IPR3 259 aaKnown RBP11.65□□□□□ -0.54
NKX3-1-202ENST00000523261 HMGN2P46Q86SG4 172 aa11.65□□□□□ -0.54
NKX3-1-202ENST00000523261 CREG2Q8IUH2 290 aa11.65□□□□□ -0.54
NKX3-1-202ENST00000523261 ZNF584Q8IVC4 421 aa11.65□□□□□ -0.54
NKX3-1-202ENST00000523261 KDM8Q8N371 416 aa11.65□□□□□ -0.54
NKX3-1-202ENST00000523261 OR7A2PQ8NGA2 310 aa11.65□□□□□ -0.54
NKX3-1-202ENST00000523261 SGCDQ92629 289 aa11.65□□□□□ -0.54
NKX3-1-202ENST00000523261 DYRK2Q92630 601 aa11.65□□□□□ -0.54
NKX3-1-202ENST00000523261 MOAP1Q96BY2 351 aa11.65□□□□□ -0.54
NKX3-1-202ENST00000523261 TAPBPLQ9BX59 468 aa11.65□□□□□ -0.54
NKX3-1-202ENST00000523261 DENND2DQ9H6A0 471 aaPredicted RBP11.65□□□□□ -0.54
NKX3-1-202ENST00000523261 EGFL7Q9UHF1 273 aa11.65□□□□□ -0.54
NKX3-1-202ENST00000523261 ATP6V1HQ9UI12 483 aa11.65□□□□□ -0.54
NKX3-1-202ENST00000523261 NPTNQ9Y639 398 aa11.65□□□□□ -0.54
NKX3-1-202ENST00000523261 TENM2Q9NT68 2774 aa11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 DNAH9Q9NYC9 4486 aa11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 DUXAA6NLW8 204 aa11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 F5H0A9 414 aaPredicted RBP11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 FAAHO00519 579 aa11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 TM9SF1O15321 606 aa11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 DHHO43323 396 aa11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 GPR137BO60478 399 aa11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 RAB36O95755 333 aa11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 C6orf47O95873 294 aa11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 SBK2P0C263 348 aa11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 TCP1P17987 556 aaKnown RBP11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 ATP5F1P24539 256 aaPredicted RBP11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 RAB1AP62820 205 aa11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 PHYHD1Q5SRE7 291 aa11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 ZNF627Q7L945 461 aa11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 C16orf62Q7Z3J2 963 aa11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 TMEM123Q8N131 208 aa11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 SPICQ8N5J4 248 aa11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 SLC47A1Q96FL8 570 aa11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 TNFRSF12AQ9NP84 129 aa11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 DCAF16Q9NXF7 216 aa11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 TMEM216Q9P0N5 145 aa11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 OR5V1Q9UGF6 321 aa11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 IL20RAQ9UHF4 553 aa11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 WDR45Q9Y484 360 aa11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 DYNC2H1Q8NCM8 4307 aaKnown RBP11.64□□□□□ -0.55
NKX3-1-202ENST00000523261 FAM187AA6NFU0 413 aa11.63□□□□□ -0.55
NKX3-1-202ENST00000523261 GOLGA6L6A8MZA4 724 aa11.63□□□□□ -0.55
NKX3-1-202ENST00000523261 ZNF500O60304 480 aaPredicted RBP11.63□□□□□ -0.55
NKX3-1-202ENST00000523261 IGHV1-46P01743 117 aa11.63□□□□□ -0.55
NKX3-1-202ENST00000523261 GUSBP08236 651 aa11.63□□□□□ -0.55
NKX3-1-202ENST00000523261 ZNF43P17038 809 aa11.63□□□□□ -0.55
NKX3-1-202ENST00000523261 MATN1P21941 496 aa11.63□□□□□ -0.55
NKX3-1-202ENST00000523261 CXCR1P25024 350 aa11.63□□□□□ -0.55
NKX3-1-202ENST00000523261 PLTPP55058 493 aa11.63□□□□□ -0.55
NKX3-1-202ENST00000523261 GLO1Q04760 184 aa11.63□□□□□ -0.55
NKX3-1-202ENST00000523261 BNIP2Q12982 314 aa11.63□□□□□ -0.55
NKX3-1-202ENST00000523261 RFTN2Q52LD8 501 aaPredicted RBP11.63□□□□□ -0.55
NKX3-1-202ENST00000523261 ZNF813Q6ZN06 617 aa11.63□□□□□ -0.55
NKX3-1-202ENST00000523261 FRRS1Q6ZNA5 592 aa11.63□□□□□ -0.55
NKX3-1-202ENST00000523261 Q6ZSV7 163 aa11.63□□□□□ -0.55
NKX3-1-202ENST00000523261 SLC22A9Q8IVM8 553 aa11.63□□□□□ -0.55
NKX3-1-202ENST00000523261 KLHL36Q8N4N3 616 aa11.63□□□□□ -0.55
NKX3-1-202ENST00000523261 PAQR4Q8N4S7 273 aaPredicted RBP11.63□□□□□ -0.55
NKX3-1-202ENST00000523261 POU5F2Q8N7G0 328 aa11.63□□□□□ -0.55
NKX3-1-202ENST00000523261 PIK3C3Q8NEB9 887 aa11.63□□□□□ -0.55
NKX3-1-202ENST00000523261 ZNF519Q8TB69 540 aa11.63□□□□□ -0.55
NKX3-1-202ENST00000523261 FBXO25Q8TCJ0 367 aa11.63□□□□□ -0.55
NKX3-1-202ENST00000523261 FAM71F1Q96KD3 344 aaPredicted RBP11.63□□□□□ -0.55
NKX3-1-202ENST00000523261 OR2M2Q96R28 347 aa11.63□□□□□ -0.55
NKX3-1-202ENST00000523261 B3GAT1Q9P2W7 334 aa11.63□□□□□ -0.55
NKX3-1-202ENST00000523261 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.63□□□□□ -0.55
NKX3-1-202ENST00000523261 M0R3G1 203 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 IGHV3-13P01766 116 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 MT-ND5P03915 603 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 SERPINA5P05154 406 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 LCKP06239 509 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 B4GALT1P15291 398 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 HPCAL1P37235 193 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 ZNF81P51508 661 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 AQP5P55064 265 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 RPL38P63173 70 aaKnown RBP11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 RBBP4Q09028 425 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 FUT5Q11128 374 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 MFSD13AQ14CX5 517 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 LSM12Q3MHD2 195 aaKnown RBP11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 TMEM155Q4W5P6 130 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 ESCO2Q56NI9 601 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 SPRNQ5BIV9 151 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 C1orf140Q5VVS0 124 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 LIPMQ5VYY2 423 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 LRRN1Q6UXK5 716 aa11.62□□□□□ -0.55
NKX3-1-202ENST00000523261 C6orf120Q7Z4R8 191 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms