RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 UBAP1Q9NZ09 502 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 B3GAT1Q9P2W7 334 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 ADAM18Q9Y3Q7 739 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 C11orf98E9PRG8 122 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 H0YC42 278 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 MS4A18H0YCH9 400 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 M0R3G1 203 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 ERVH48-1M5A8F1 160 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 SMAD9O15198 467 aaKnown RBP11.67□□□□□ -0.54
CPNE3-205ENST00000522240 PRKYO43930 277 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 F13BP05160 661 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 CXCR4P61073 352 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 RPL27P61353 136 aaKnown RBP11.67□□□□□ -0.54
CPNE3-205ENST00000522240 ERVK-25P63136 954 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 HSF1Q00613 529 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 KRR1Q13601 381 aaKnown RBP11.67□□□□□ -0.54
CPNE3-205ENST00000522240 MS4A18Q3C1V0 323 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 MEDAGQ5VYS4 303 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 ZNF324BQ6AW86 544 aaPredicted RBP11.67□□□□□ -0.54
CPNE3-205ENST00000522240 UGT2A3Q6UWM9 527 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 ADCK1Q86TW2 530 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 GHDCQ8N2G8 530 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 FAM26EQ8N5C1 309 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 TCEANCQ8N8B7 351 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 EXD3Q8N9H8 876 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 ZNF519Q8TB69 540 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 APH1BQ8WW43 257 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 HDAC2Q92769 488 aaKnown RBP11.67□□□□□ -0.54
CPNE3-205ENST00000522240 ZNF566Q969W8 418 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 RELTQ969Z4 430 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 WDYHV1Q96HA8 205 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 GPR137Q96N19 417 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 OXGR1Q96P68 337 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 TSPAN32Q96QS1 320 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 SNX18Q96RF0 628 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 TIMP4Q99727 224 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 SF3B5Q9BWJ5 86 aaKnown RBP11.67□□□□□ -0.54
CPNE3-205ENST00000522240 YTHDF1Q9BYJ9 559 aaKnown RBP11.67□□□□□ -0.54
CPNE3-205ENST00000522240 SLC25A18Q9H1K4 315 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 TSPAN10Q9H1Z9 355 aaPredicted RBP11.67□□□□□ -0.54
CPNE3-205ENST00000522240 MCTS1Q9ULC4 181 aaKnown RBP11.67□□□□□ -0.54
CPNE3-205ENST00000522240 IER3IP1Q9Y5U9 82 aa11.67□□□□□ -0.54
CPNE3-205ENST00000522240 TEX13CA0A0J9YWL9 993 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 SH3D21A4FU49 640 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 A6NIZ1 184 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 ZNF814B7Z6K7 855 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 NPIPA5E9PKD4 350 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 M0R129 80 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 TRAF3IP2O43734 574 aaPredicted RBP11.66□□□□□ -0.54
CPNE3-205ENST00000522240 SYNGR4O95473 234 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 PRB1P04280 392 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 CCDC159P0C7I6 412 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 PAICSP22234 425 aaKnown RBP11.66□□□□□ -0.54
CPNE3-205ENST00000522240 AHCYP23526 432 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 CHN2P52757 468 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 SLC16A1P53985 500 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 RAP1BP61224 184 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 RAP1AP62834 184 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 POU3F1Q03052 451 aaPredicted RBP11.66□□□□□ -0.54
CPNE3-205ENST00000522240 KLRB1Q12918 225 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 CDK5R2Q13319 367 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 TOP3AQ13472 1001 aaPredicted RBP11.66□□□□□ -0.54
CPNE3-205ENST00000522240 ACKR1Q16570 336 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 OCLNQ16625 522 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 KRTCAP3Q53RY4 240 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 RBM48Q5RL73 367 aaKnown RBP11.66□□□□□ -0.54
CPNE3-205ENST00000522240 C6orf141Q5SZD1 244 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 CCDC103Q8IW40 242 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 UEVLDQ8IX04 471 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 ZNF843Q8N446 348 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 ARIH2OSQ8N7S6 290 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 TEX19Q8NA77 164 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 CNIH3Q8TBE1 160 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 RNF128Q8TEB7 428 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 Q96M85 177 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 Q96MT0 163 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 RASSF1Q9NS23 344 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 CLN6Q9NWW5 311 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 GRHPRQ9UBQ7 328 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 NPIPA1Q9UND3 350 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 ZNF175Q9Y473 711 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 MED12Q93074 2177 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 HECTD1Q9ULT8 2610 aa11.66□□□□□ -0.54
CPNE3-205ENST00000522240 KDM4EB2RXH2 506 aaPredicted RBP11.65□□□□□ -0.54
CPNE3-205ENST00000522240 SLC1A7O00341 560 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 AKAP8O43823 692 aaKnown RBP11.65□□□□□ -0.54
CPNE3-205ENST00000522240 CYTIPO60759 359 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 RAMP1O60894 148 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 WBP4O75554 376 aaKnown RBP11.65□□□□□ -0.54
CPNE3-205ENST00000522240 TNFAIP8O95379 198 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 PLGP00747 810 aaPredicted RBP11.65□□□□□ -0.54
CPNE3-205ENST00000522240 PLA2G2AP14555 144 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 HIST1H1CP16403 213 aaKnown RBP11.65□□□□□ -0.54
CPNE3-205ENST00000522240 ZNF43P17038 809 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 KLK2P20151 261 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 MLLT10P55197 1068 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 CSNK2BP67870 215 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 SRYQ05066 204 aa11.65□□□□□ -0.54
CPNE3-205ENST00000522240 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.65□□□□□ -0.54
CPNE3-205ENST00000522240 CRMP1Q14194 572 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms