RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 GDPD3Q7L5L3 318 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 CEACAM19Q7Z692 300 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 MARCH3Q86UD3 253 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 LRRC28Q86X40 367 aaPredicted RBP9.03□□□□□ -0.96
SPARC-202ENST00000520687 EXD3Q8N9H8 876 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 RPS4Y2Q8TD47 263 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 RNF138Q8WVD3 245 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 GHSRQ92847 366 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 ZMYND19Q96E35 227 aaPredicted RBP9.03□□□□□ -0.96
SPARC-202ENST00000520687 NMNAT3Q96T66 252 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 TBX5Q99593 518 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 ALG12Q9BV10 488 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 ZCCHC4Q9H5U6 513 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 RERGLQ9H628 205 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 SACM1LQ9NTJ5 587 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 TAS2R10Q9NYW0 307 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 CTSFQ9UBX1 484 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 ST6GALNAC2Q9UJ37 374 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 ADAM18Q9Y3Q7 739 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 SIRT4Q9Y6E7 314 aaPredicted RBP9.03□□□□□ -0.96
SPARC-202ENST00000520687 U3KQA8 63 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 TMED7-TICAM2A0A0A6YYA0 188 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 A0A1W2PQM1 296 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 NPIPB13A6NJU9 1138 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 CD8B2A6NJW9 211 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 C4orf47A7E2U8 309 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 NPIPB4C9JG80 1138 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 ETV2O00321 342 aaPredicted RBP9.03□□□□□ -0.96
SPARC-202ENST00000520687 XKRYO14609 159 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 PDCD5O14737 125 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 SNPHO15079 494 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 ATXN7O15265 892 aaPredicted RBP9.03□□□□□ -0.96
SPARC-202ENST00000520687 CPNE3O75131 537 aaKnown RBP9.03□□□□□ -0.96
SPARC-202ENST00000520687 DXOO77932 396 aaKnown RBP9.03□□□□□ -0.96
SPARC-202ENST00000520687 OR6A2O95222 327 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 AHSA1O95433 338 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 NUDT14O95848 222 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 IGHMP01871 453 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 SYPP08247 313 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 MRPL3P09001 348 aaKnown RBP9.03□□□□□ -0.96
SPARC-202ENST00000520687 CLUP10909 449 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 CD8BP10966 210 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 MST1P26927 711 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 EGR3Q06889 387 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 RPL18Q07020 188 aaKnown RBP9.03□□□□□ -0.96
SPARC-202ENST00000520687 QPRTQ15274 297 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 ZNF79Q15937 498 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 PYDC2Q56P42 97 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 YIF1BQ5BJH7 314 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 LINC01590Q5TEZ4 76 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 PRAMEF17Q5VTA0 474 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 FAM205BPQ63HN1 556 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 ZNF385CQ66K41 422 aaPredicted RBP9.03□□□□□ -0.96
SPARC-202ENST00000520687 MZT2BQ6NZ67 158 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 CCBE1Q6UXH8 406 aaPredicted RBP9.03□□□□□ -0.96
SPARC-202ENST00000520687 UNQ9370/PRO34162Q6UXP9 181 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 B3GLCTQ6Y288 498 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 FAM220AQ7Z4H9 259 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 CPEB2Q7Z5Q1 589 aaKnown RBP9.03□□□□□ -0.96
SPARC-202ENST00000520687 ZNF248Q8NDW4 579 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 OR5J2Q8NH18 312 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 ASB17Q8WXJ9 295 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 PIGKQ92643 395 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 TAAR8Q969N4 342 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 KTI12Q96EK9 354 aaPredicted RBP9.03□□□□□ -0.96
SPARC-202ENST00000520687 PELI1Q96FA3 418 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 PGLYRP3Q96LB9 341 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 CCDC74BQ96LY2 380 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 Q96M85 177 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 KLHL15Q96M94 604 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 MOGAT1Q96PD6 335 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 CCDC86Q9H6F5 360 aaKnown RBP9.03□□□□□ -0.96
SPARC-202ENST00000520687 GAREM1Q9H706 876 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 PPP1R3EQ9H7J1 279 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 MARCH7Q9H992 704 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 MOV10Q9HCE1 1003 aaKnown RBP9.03□□□□□ -0.96
SPARC-202ENST00000520687 KLHL1Q9NR64 748 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 MRPL39Q9NYK5 338 aaKnown RBP9.03□□□□□ -0.96
SPARC-202ENST00000520687 ABRACLQ9P1F3 81 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 COMMD3Q9UBI1 195 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 TEKT2Q9UIF3 430 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 TMED7Q9Y3B3 224 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 FKBP7Q9Y680 259 aa9.03□□□□□ -0.96
SPARC-202ENST00000520687 NUP210LQ5VU65 1888 aa9.02□□□□□ -0.97
SPARC-202ENST00000520687 IGLV3-32A0A0A0MS00 114 aa9.02□□□□□ -0.97
SPARC-202ENST00000520687 TRBV2A0A0J9YWF9 115 aa9.02□□□□□ -0.97
SPARC-202ENST00000520687 A6NIZ1 184 aa9.02□□□□□ -0.97
SPARC-202ENST00000520687 NOTOA8MTQ0 251 aa9.02□□□□□ -0.97
SPARC-202ENST00000520687 ZNF208O43345 1280 aa9.02□□□□□ -0.97
SPARC-202ENST00000520687 SUSD5O60279 629 aa9.02□□□□□ -0.97
SPARC-202ENST00000520687 TFP02787 698 aa9.02□□□□□ -0.97
SPARC-202ENST00000520687 GYPBP06028 91 aa9.02□□□□□ -0.97
SPARC-202ENST00000520687 UCHL1P09936 223 aa9.02□□□□□ -0.97
SPARC-202ENST00000520687 MAPK3P27361 379 aaPredicted RBP9.02□□□□□ -0.97
SPARC-202ENST00000520687 APEX1P27695 318 aaKnown RBP9.02□□□□□ -0.97
SPARC-202ENST00000520687 MPLP40238 635 aa9.02□□□□□ -0.97
SPARC-202ENST00000520687 CDKN2AP42771 156 aaKnown RBP9.02□□□□□ -0.97
SPARC-202ENST00000520687 RPS5P46782 204 aaKnown RBP9.02□□□□□ -0.97
SPARC-202ENST00000520687 GDI2P50395 445 aaKnown RBP9.02□□□□□ -0.97
SPARC-202ENST00000520687 TPTEP56180 551 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms