RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 OR4K14Q8NGD5 310 aa2.05□□□□□ -2.08
SKP1-207ENST00000520417 UBE2Q2Q8WVN8 375 aa2.05□□□□□ -2.08
SKP1-207ENST00000520417 EFHD2Q96C19 240 aaPredicted RBP2.05□□□□□ -2.08
SKP1-207ENST00000520417 PAGE5Q96GU1 130 aa2.05□□□□□ -2.08
SKP1-207ENST00000520417 CLCC1Q96S66 551 aa2.05□□□□□ -2.08
SKP1-207ENST00000520417 ERP44Q9BS26 406 aa2.05□□□□□ -2.08
SKP1-207ENST00000520417 RAB34Q9BZG1 259 aa2.05□□□□□ -2.08
SKP1-207ENST00000520417 ACTR6Q9GZN1 396 aa2.05□□□□□ -2.08
SKP1-207ENST00000520417 LRRN3Q9H3W5 708 aa2.05□□□□□ -2.08
SKP1-207ENST00000520417 REEP4Q9H6H4 257 aa2.05□□□□□ -2.08
SKP1-207ENST00000520417 SUDS3Q9H7L9 328 aaPredicted RBP2.05□□□□□ -2.08
SKP1-207ENST00000520417 UFSP2Q9NUQ7 469 aa2.05□□□□□ -2.08
SKP1-207ENST00000520417 TIMM10BQ9Y5J6 103 aa2.05□□□□□ -2.08
SKP1-207ENST00000520417 IGSF9BQ9UPX0 1349 aa2.05□□□□□ -2.08
SKP1-207ENST00000520417 KDRP35968 1356 aa2.05□□□□□ -2.08
SKP1-207ENST00000520417 COL5A1P20908 1838 aaPredicted RBP2.05□□□□□ -2.08
SKP1-207ENST00000520417 NSG1A0A0A6YYJ2 146 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 A0A1W2PP18 115 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 A8MXQ7 604 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 PRRG1O14668 218 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 ARPC3O15145 178 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 MAGEB3O15480 346 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 MED7O43513 233 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 DIRAS1O95057 198 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 OXSR1O95747 527 aaPredicted RBP2.04□□□□□ -2.08
SKP1-207ENST00000520417 IQCF3P0C7M6 154 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 CNR1P21554 472 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 GNA11P29992 359 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 BTCP35070 178 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 MAP3K8P41279 467 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 C1orf61Q13536 156 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 KIAA0087Q14695 138 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 MICBQ29980 383 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 PARP15Q460N3 678 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 COX19Q49B96 90 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 BCL7AQ4VC05 210 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 DMRTC1Q5HYR2 192 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 MARCH8Q5T0T0 291 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 OR4F15Q8NGB8 312 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 OR10G9Q8NGN4 311 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 RBM14Q96PK6 669 aaKnown RBP2.04□□□□□ -2.08
SKP1-207ENST00000520417 SECISBP2Q96T21 854 aaKnown RBP2.04□□□□□ -2.08
SKP1-207ENST00000520417 RNF2Q99496 336 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 MRPL45Q9BRJ2 306 aaKnown RBP2.04□□□□□ -2.08
SKP1-207ENST00000520417 NHEJ1Q9H9Q4 299 aaPredicted RBP2.04□□□□□ -2.08
SKP1-207ENST00000520417 WFDC1Q9HC57 220 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 THUMPD1Q9NXG2 353 aaKnown RBP2.04□□□□□ -2.08
SKP1-207ENST00000520417 HOXC10Q9NYD6 342 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 PIPOXQ9P0Z9 390 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 EPS15L1Q9UBC2 864 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 SEC14L3Q9UDX4 400 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 GGA2Q9UJY4 613 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 BLOC1S6Q9UL45 172 aa2.04□□□□□ -2.08
SKP1-207ENST00000520417 RBMY1BA6NDE4 496 aaKnown RBP2.03□□□□□ -2.08
SKP1-207ENST00000520417 RBMY1EA6NEQ0 496 aaKnown RBP2.03□□□□□ -2.08
SKP1-207ENST00000520417 MTX2O75431 263 aa2.03□□□□□ -2.08
SKP1-207ENST00000520417 CBR3O75828 277 aa2.03□□□□□ -2.08
SKP1-207ENST00000520417 RBMY1DP0C7P1 496 aaKnown RBP2.03□□□□□ -2.08
SKP1-207ENST00000520417 RBMY1A1P0DJD3 496 aaKnown RBP2.03□□□□□ -2.08
SKP1-207ENST00000520417 TCN2P20062 427 aa2.03□□□□□ -2.08
SKP1-207ENST00000520417 PRPHP41219 470 aa2.03□□□□□ -2.08
SKP1-207ENST00000520417 RPS14P62263 151 aaKnown RBP2.03□□□□□ -2.08
SKP1-207ENST00000520417 FGL1Q08830 312 aa2.03□□□□□ -2.08
SKP1-207ENST00000520417 NCBP1Q09161 790 aaKnown RBP2.03□□□□□ -2.08
SKP1-207ENST00000520417 FBXW9Q5XUX1 488 aa2.03□□□□□ -2.08
SKP1-207ENST00000520417 UTS2BQ765I0 119 aa2.03□□□□□ -2.08
SKP1-207ENST00000520417 VSTM4Q8IW00 320 aa2.03□□□□□ -2.08
SKP1-207ENST00000520417 ACOT4Q8N9L9 421 aa2.03□□□□□ -2.08
SKP1-207ENST00000520417 GMCL1P1Q8NEA9 526 aa2.03□□□□□ -2.08
SKP1-207ENST00000520417 CATSPER1Q8NEC5 780 aa2.03□□□□□ -2.08
SKP1-207ENST00000520417 ZNF461Q8TAF7 563 aa2.03□□□□□ -2.08
SKP1-207ENST00000520417 RSPH1Q8WYR4 309 aa2.03□□□□□ -2.08
SKP1-207ENST00000520417 DNAJC19Q96DA6 116 aa2.03□□□□□ -2.08
SKP1-207ENST00000520417 CXorf40BQ96DE9 158 aa2.03□□□□□ -2.08
SKP1-207ENST00000520417 CMTM7Q96FZ5 175 aa2.03□□□□□ -2.08
SKP1-207ENST00000520417 OR10C1Q96KK4 312 aa2.03□□□□□ -2.08
SKP1-207ENST00000520417 RPRD1AQ96P16 312 aaPredicted RBP2.03□□□□□ -2.08
SKP1-207ENST00000520417 TSGA13Q96PP4 275 aa2.03□□□□□ -2.08
SKP1-207ENST00000520417 DNTTIP1Q9H147 329 aa2.03□□□□□ -2.08
SKP1-207ENST00000520417 SPNS1Q9H2V7 528 aa2.03□□□□□ -2.08
SKP1-207ENST00000520417 RNF167Q9H6Y7 350 aa2.03□□□□□ -2.08
SKP1-207ENST00000520417 KCNIP1Q9NZI2 227 aa2.03□□□□□ -2.08
SKP1-207ENST00000520417 BFARQ9NZS9 450 aa2.03□□□□□ -2.08
SKP1-207ENST00000520417 ATP6V0A2Q9Y487 856 aa2.03□□□□□ -2.08
SKP1-207ENST00000520417 NUP214P35658 2090 aaPredicted RBP2.02□□□□□ -2.09
SKP1-207ENST00000520417 RPAP1Q9BWH6 1393 aaPredicted RBP2.02□□□□□ -2.09
SKP1-207ENST00000520417 IGKV3D-11A0A0A0MRZ8 115 aa2.02□□□□□ -2.09
SKP1-207ENST00000520417 C15orf38-AP3S2A0A0A6YYH1 394 aa2.02□□□□□ -2.09
SKP1-207ENST00000520417 TCRBV9S1A1TA0A576 114 aa2.02□□□□□ -2.09
SKP1-207ENST00000520417 LOC110117498-PIK3R3F6TDL0 507 aa2.02□□□□□ -2.09
SKP1-207ENST00000520417 IGHG4P01861 327 aa2.02□□□□□ -2.09
SKP1-207ENST00000520417 ADRA2AP08913 450 aa2.02□□□□□ -2.09
SKP1-207ENST00000520417 DBTP11182 482 aaKnown RBP2.02□□□□□ -2.09
SKP1-207ENST00000520417 PCMT1P22061 227 aa2.02□□□□□ -2.09
SKP1-207ENST00000520417 IL12AP29459 219 aa2.02□□□□□ -2.09
SKP1-207ENST00000520417 GSSP48637 474 aa2.02□□□□□ -2.09
SKP1-207ENST00000520417 CASP4P49662 377 aa2.02□□□□□ -2.09
SKP1-207ENST00000520417 KRTAP12-4P60329 112 aa2.02□□□□□ -2.09
SKP1-207ENST00000520417 TNFRSF17Q02223 184 aa2.02□□□□□ -2.09
SKP1-207ENST00000520417 PLD1Q13393 1074 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms