RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 NADKO95544 446 aaPredicted RBP6.15□□□□□ -1.42
SDCBP-208ENST00000520228 P04436 131 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 NR2F1P10589 423 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 CNR1P21554 472 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 HPCAL1P37235 193 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 POU3F1Q03052 451 aaPredicted RBP6.15□□□□□ -1.42
SDCBP-208ENST00000520228 GAGE2BQ13066 116 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 CEBPEQ15744 281 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 NTRK2Q16620 822 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 GAGE2EQ4V326 116 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 IL23RQ5VWK5 629 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 OR7E24Q6IFN5 339 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 ANKRD26P1Q6NSI1 321 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 GAGE2AQ6NT46 116 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 TMEM64Q6YI46 380 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 FOXL2NBQ6ZUU3 175 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 DND1Q8IYX4 353 aaKnown RBP6.15□□□□□ -1.42
SDCBP-208ENST00000520228 LIX1Q8N485 282 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 CPSF7Q8N684 471 aaKnown RBP6.15□□□□□ -1.42
SDCBP-208ENST00000520228 FNDC5Q8NAU1 212 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 POGLUT1Q8NBL1 392 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 POC1AQ8NBT0 407 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 ST6GALNAC3Q8NDV1 305 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 C17orf47Q8NEP4 570 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 OR52I2Q8NH67 350 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 CLHC1Q8NHS4 586 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 RAB3IL1Q8TBN0 382 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 ZNF675Q8TD23 568 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 ADIPOR1Q96A54 375 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 PPCDCQ96CD2 204 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 MTERF3Q96E29 417 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 SPACA9Q96E40 222 aaPredicted RBP6.15□□□□□ -1.42
SDCBP-208ENST00000520228 ATP6V1G3Q96LB4 118 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 PPP1R36Q96LQ0 422 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 AMDHD1Q96NU7 426 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 SORT1Q99523 831 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 C1orf50Q9BV19 199 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 KRTAP9-8Q9BYQ0 159 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 REEP4Q9H6H4 257 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 VIPAS39Q9H9C1 493 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 SEC14L3Q9UDX4 400 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 GAGE2DQ9UEU5 116 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 PRODH2Q9UF12 536 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 KCNG2Q9UJ96 466 aa6.15□□□□□ -1.42
SDCBP-208ENST00000520228 EIF3LQ9Y262 564 aaKnown RBP6.15□□□□□ -1.42
SDCBP-208ENST00000520228 NPIPA5E9PKD4 350 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 G3V3Y1 287 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 TMEM178BH3BS89 294 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 TP53I11O14683 189 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 ACOX3O15254 700 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 TBX19O60806 448 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 KRT36O76013 467 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 CCL3P10147 92 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 PRPS2P11908 318 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 ZNF24P17028 368 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 PRPS1L1P21108 318 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 DRD5P21918 477 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 GPX3P22352 226 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 RFC3P40938 356 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 PPICP45877 212 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 TMED10P49755 219 aaKnown RBP6.14□□□□□ -1.43
SDCBP-208ENST00000520228 EMDP50402 254 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 TDGF1P3P51864 188 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 KCNK10P57789 538 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 PLGLB1Q02325 96 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 EMX2Q04743 252 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 PDE7AQ13946 482 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 NNATQ16517 81 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 SMU1Q2TAY7 513 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 TTMPQ5BVD1 217 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 CPTPQ5TA50 214 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 FHL5Q5TD97 284 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 SLC22A10Q63ZE4 541 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 TMEM107Q6UX40 140 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 FAM47EQ6ZV65 393 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 PLEKHM3Q6ZWE6 761 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 GALNT5Q7Z7M9 940 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 ZFP62Q8NB50 900 aaPredicted RBP6.14□□□□□ -1.43
SDCBP-208ENST00000520228 OR2M7Q8NG81 312 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 OR7G2Q8NG99 324 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 OR10G3Q8NGC4 313 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 PAQR8Q8TEZ7 354 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 CIDECQ96AQ7 238 aaPredicted RBP6.14□□□□□ -1.43
SDCBP-208ENST00000520228 ZBED6CLQ96FA7 236 aaPredicted RBP6.14□□□□□ -1.43
SDCBP-208ENST00000520228 MAGED4Q96JG8 741 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 FAM173AQ9BQD7 235 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 RTN4RQ9BZR6 473 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 NXF5Q9H1B4 397 aaKnown RBP6.14□□□□□ -1.43
SDCBP-208ENST00000520228 GLIPR2Q9H4G4 154 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 ANKRA2Q9H9E1 313 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 FKRPQ9H9S5 495 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 SH2D2AQ9NP31 389 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 DEPPQ9NTK1 212 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 DDX18Q9NVP1 670 aaKnown RBP6.14□□□□□ -1.43
SDCBP-208ENST00000520228 TAS2R9Q9NYW1 312 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 CNIH4Q9P003 139 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 ATP6V1HQ9UI12 483 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 RPS6KA6Q9UK32 745 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 NPIPA1Q9UND3 350 aa6.14□□□□□ -1.43
SDCBP-208ENST00000520228 CNTRLQ7Z7A1 2325 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms