RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 OR5T3Q8NGG3 340 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 ZFAND1Q8TCF1 268 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 DEDD2Q8WXF8 326 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 RFT1Q96AA3 541 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 C3orf49Q96BT1 292 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 UPRTQ96BW1 309 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 SGTBQ96EQ0 304 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 PELI1Q96FA3 418 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 SCMH1Q96GD3 660 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 PEX11GQ96HA9 241 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 ARL5BQ96KC2 179 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 C4orf36Q96KX1 117 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 TNFRSF13CQ96RJ3 184 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 CNN2Q99439 309 aaKnown RBP4.6□□□□□ -1.67
SDC2-204ENST00000519914 MNTQ99583 582 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 WACQ9BTA9 647 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 IFT27Q9BW83 186 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 PPIL3Q9H2H8 161 aaKnown RBP4.6□□□□□ -1.67
SDC2-204ENST00000519914 MED20Q9H944 212 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 CERS4Q9HA82 394 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 PLEKHA1Q9HB21 404 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 Q9N2J8 555 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 FAM60AQ9NP50 221 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 MKKSQ9NPJ1 570 aaPredicted RBP4.6□□□□□ -1.67
SDC2-204ENST00000519914 ACOXLQ9NUZ1 547 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 B3GNT2Q9NY97 397 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 SEMA5BQ9P283 1151 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 COPZ2Q9P299 210 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 EXTL2Q9UBQ6 330 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 PRODH2Q9UF12 536 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 EPHA6Q9UF33 1036 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 MSRAQ9UJ68 235 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 SPATA2Q9UM82 520 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 MOKQ9UQ07 419 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 CAMK2AQ9UQM7 478 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 MRPS33Q9Y291 106 aaKnown RBP4.6□□□□□ -1.67
SDC2-204ENST00000519914 ZNF337Q9Y3M9 751 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 MMACHCQ9Y4U1 282 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 PIAS3Q9Y6X2 628 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 TRANK1O15050 2925 aa4.6□□□□□ -1.67
SDC2-204ENST00000519914 TDRD6O60522 2096 aaKnown RBP4.59□□□□□ -1.67
SDC2-204ENST00000519914 TP53BP1Q12888 1972 aaPredicted RBP4.59□□□□□ -1.67
SDC2-204ENST00000519914 IGKV1D-42A0A075B6H8 117 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 TRAV27A0A087WT01 109 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 NPIPA5A0A0B4J1W7 369 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 FAM240BA0A1B0GVZ2 78 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 A0A1W2PPC4 97 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 A0A1W2PQ72 361 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 A0A1W2PRG6 482 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 TCRBV21S2A2A0A5A6 115 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 ZC3H12DA2A288 527 aaKnown RBP4.59□□□□□ -1.67
SDC2-204ENST00000519914 ZNF860A6NHJ4 632 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 PRSS44E7EML9 344 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 NPIPA7E9PJI5 369 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 INMT-MINDY4F8WBC2 141 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 H3BMH7 237 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 TO15178 435 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 HCRTR1O43613 425 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 OR10H2O60403 315 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 RDH16O75452 317 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 ITGA10O75578 1167 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 ARL6IP5O75915 188 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 NCR1O76036 304 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 GLCEO94923 617 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 EIF4EP06730 217 aaKnown RBP4.59□□□□□ -1.67
SDC2-204ENST00000519914 NPIPA8P0DM63 369 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 TFPIP10646 304 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 PNMTP11086 282 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 NME1P15531 152 aaKnown RBP4.59□□□□□ -1.67
SDC2-204ENST00000519914 ARSBP15848 533 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 HIST1H1CP16403 213 aaKnown RBP4.59□□□□□ -1.67
SDC2-204ENST00000519914 FUT1P19526 365 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 BTF3P20290 206 aaKnown RBP4.59□□□□□ -1.67
SDC2-204ENST00000519914 RAB3BP20337 219 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 AHCYP23526 432 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 EVI2BP34910 448 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 ATP6V1E1P36543 226 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 LTBRP36941 435 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 PITPNBP48739 271 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 GDI2P50395 445 aaKnown RBP4.59□□□□□ -1.67
SDC2-204ENST00000519914 AGFG1P52594 562 aaKnown RBP4.59□□□□□ -1.67
SDC2-204ENST00000519914 NKX2-5P52952 324 aaPredicted RBP4.59□□□□□ -1.67
SDC2-204ENST00000519914 SLURP1P55000 103 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 SCAND1P57086 179 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 OR12D2P58182 307 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 RRAS2P62070 204 aaPredicted RBP4.59□□□□□ -1.67
SDC2-204ENST00000519914 POLR2GP62487 172 aaKnown RBP eCLIP4.59□□□□□ -1.67
SDC2-204ENST00000519914 PITPNAQ00169 270 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 E2F1Q01094 437 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 ID2Q02363 134 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 HHEXQ03014 270 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 CRYZQ08257 329 aaKnown RBP4.59□□□□□ -1.67
SDC2-204ENST00000519914 FAPQ12884 760 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 EFR3AQ14156 821 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 GPR176Q14439 515 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 INSL4Q14641 139 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 RTP5Q14D33 572 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 CARTPTQ16568 116 aa4.59□□□□□ -1.67
SDC2-204ENST00000519914 PLEKHN1Q494U1 663 aaPredicted RBP4.59□□□□□ -1.67
SDC2-204ENST00000519914 SLC36A2Q495M3 483 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms