RNA–Protein interactions for RNA: ENST00000519120.1

MRPS28-204, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-204ENST00000519120 VSTM5A8MXK1 200 aa13.7□□□□□ -0.22
MRPS28-204ENST00000519120 VWC2LB2RUY7 222 aa13.7□□□□□ -0.22
MRPS28-204ENST00000519120 CHP2O43745 196 aa13.7□□□□□ -0.22
MRPS28-204ENST00000519120 GPRIN2O60269 458 aa13.7□□□□□ -0.22
MRPS28-204ENST00000519120 EDF1O60869 148 aaKnown RBP13.7□□□□□ -0.22
MRPS28-204ENST00000519120 PPOXP50336 477 aa13.7□□□□□ -0.22
MRPS28-204ENST00000519120 PMS2P3Q13401 168 aa13.7□□□□□ -0.22
MRPS28-204ENST00000519120 ADIPOQQ15848 244 aa13.7□□□□□ -0.22
MRPS28-204ENST00000519120 CYP51A1Q16850 503 aa13.7□□□□□ -0.22
MRPS28-204ENST00000519120 PATL1Q86TB9 770 aaKnown RBP13.7□□□□□ -0.22
MRPS28-204ENST00000519120 RETREG3Q86VR2 466 aa13.7□□□□□ -0.22
MRPS28-204ENST00000519120 SNX32Q86XE0 403 aa13.7□□□□□ -0.22
MRPS28-204ENST00000519120 NANOS1Q8WY41 292 aaKnown RBP13.7□□□□□ -0.22
MRPS28-204ENST00000519120 HTRA1Q92743 480 aa13.7□□□□□ -0.22
MRPS28-204ENST00000519120 SORCS2Q96PQ0 1159 aa13.7□□□□□ -0.22
MRPS28-204ENST00000519120 MCHR1Q99705 422 aa13.7□□□□□ -0.22
MRPS28-204ENST00000519120 MDFIQ99750 246 aa13.7□□□□□ -0.22
MRPS28-204ENST00000519120 WFDC6Q9BQY6 131 aa13.7□□□□□ -0.22
MRPS28-204ENST00000519120 KAT8Q9H7Z6 458 aaKnown RBP13.7□□□□□ -0.22
MRPS28-204ENST00000519120 B3GAT2Q9NPZ5 323 aa13.7□□□□□ -0.22
MRPS28-204ENST00000519120 MRGBPQ9NV56 204 aa13.7□□□□□ -0.22
MRPS28-204ENST00000519120 USP22Q9UPT9 525 aa13.7□□□□□ -0.22
MRPS28-204ENST00000519120 HEATR1Q9H583 2144 aaKnown RBP13.69□□□□□ -0.22
MRPS28-204ENST00000519120 ABCA1O95477 2261 aa13.69□□□□□ -0.22
MRPS28-204ENST00000519120 M0QX08 132 aa13.69□□□□□ -0.22
MRPS28-204ENST00000519120 HPRP00739 348 aa13.69□□□□□ -0.22
MRPS28-204ENST00000519120 IFNA2P01563 188 aa13.69□□□□□ -0.22
MRPS28-204ENST00000519120 OR4A8P0C604 315 aa13.69□□□□□ -0.22
MRPS28-204ENST00000519120 USF1P22415 310 aaPredicted RBP13.69□□□□□ -0.22
MRPS28-204ENST00000519120 CBLP22681 906 aa13.69□□□□□ -0.22
MRPS28-204ENST00000519120 CALCRP30988 508 aa13.69□□□□□ -0.22
MRPS28-204ENST00000519120 PDLIM4P50479 330 aa13.69□□□□□ -0.22
MRPS28-204ENST00000519120 MTPNP58546 118 aa13.69□□□□□ -0.22
MRPS28-204ENST00000519120 TUBA1BP68363 451 aa13.69□□□□□ -0.22
MRPS28-204ENST00000519120 TUBA4AP68366 448 aa13.69□□□□□ -0.22
MRPS28-204ENST00000519120 IL1RL1Q01638 556 aa13.69□□□□□ -0.22
MRPS28-204ENST00000519120 POU3F1Q03052 451 aaPredicted RBP13.69□□□□□ -0.22
MRPS28-204ENST00000519120 DUSP7Q16829 419 aa13.69□□□□□ -0.22
MRPS28-204ENST00000519120 INTS11Q5TA45 600 aaKnown RBP13.69□□□□□ -0.22
MRPS28-204ENST00000519120 PODNL1Q6PEZ8 512 aa13.69□□□□□ -0.22
MRPS28-204ENST00000519120 TUBA1AQ71U36 451 aa13.69□□□□□ -0.22
MRPS28-204ENST00000519120 SMYD1Q8NB12 490 aa13.69□□□□□ -0.22
MRPS28-204ENST00000519120 GPR32P1Q8NGA4 272 aa13.69□□□□□ -0.22
MRPS28-204ENST00000519120 RNF217Q8TC41 542 aa13.69□□□□□ -0.22
MRPS28-204ENST00000519120 RASSF5Q8WWW0 418 aa13.69□□□□□ -0.22
MRPS28-204ENST00000519120 ZNF837Q96EG3 531 aaPredicted RBP13.69□□□□□ -0.22
MRPS28-204ENST00000519120 MOGAT1Q96PD6 335 aa13.69□□□□□ -0.22
MRPS28-204ENST00000519120 PCDHAC1Q9H158 963 aa13.69□□□□□ -0.22
MRPS28-204ENST00000519120 DENND2DQ9H6A0 471 aaPredicted RBP13.69□□□□□ -0.22
MRPS28-204ENST00000519120 B3GNT2Q9NY97 397 aa13.69□□□□□ -0.22
MRPS28-204ENST00000519120 CDC42EP3Q9UKI2 254 aa13.69□□□□□ -0.22
MRPS28-204ENST00000519120 SONP18583 2426 aaKnown RBP13.68□□□□□ -0.22
MRPS28-204ENST00000519120 IGHV2OR16-5A0A0B4J2B6 119 aa13.68□□□□□ -0.22
MRPS28-204ENST00000519120 LOC390937A0A1W2PQ73 354 aa13.68□□□□□ -0.22
MRPS28-204ENST00000519120 SLC35F4A4IF30 521 aa13.68□□□□□ -0.22
MRPS28-204ENST00000519120 M0R3G1 203 aa13.68□□□□□ -0.22
MRPS28-204ENST00000519120 M0R3H8 397 aa13.68□□□□□ -0.22
MRPS28-204ENST00000519120 PLPP3O14495 311 aa13.68□□□□□ -0.22
MRPS28-204ENST00000519120 VIMP08670 466 aaKnown RBP13.68□□□□□ -0.22
MRPS28-204ENST00000519120 HLA-DOBP13765 273 aa13.68□□□□□ -0.22
MRPS28-204ENST00000519120 PCGF2P35227 344 aa13.68□□□□□ -0.22
MRPS28-204ENST00000519120 IDH3GP51553 393 aaPredicted RBP13.68□□□□□ -0.22
MRPS28-204ENST00000519120 HGFACQ04756 655 aa13.68□□□□□ -0.22
MRPS28-204ENST00000519120 NFYCQ13952 458 aa13.68□□□□□ -0.22
MRPS28-204ENST00000519120 CHRFAM7AQ494W8 412 aa13.68□□□□□ -0.22
MRPS28-204ENST00000519120 CXXC5Q7LFL8 322 aaKnown RBP13.68□□□□□ -0.22
MRPS28-204ENST00000519120 SLC46A3Q7Z3Q1 461 aa13.68□□□□□ -0.22
MRPS28-204ENST00000519120 OR6T1Q8NGN1 323 aa13.68□□□□□ -0.22
MRPS28-204ENST00000519120 OR5J2Q8NH18 312 aa13.68□□□□□ -0.22
MRPS28-204ENST00000519120 SPATA3Q8NHX4 192 aa13.68□□□□□ -0.22
MRPS28-204ENST00000519120 MPP4Q96JB8 637 aa13.68□□□□□ -0.22
MRPS28-204ENST00000519120 PIMREGQ9BSJ6 248 aa13.68□□□□□ -0.22
MRPS28-204ENST00000519120 SLC19A3Q9BZV2 496 aa13.68□□□□□ -0.22
MRPS28-204ENST00000519120 SEC61A2Q9H9S3 476 aa13.68□□□□□ -0.22
MRPS28-204ENST00000519120 ARGLU1Q9NWB6 273 aaPredicted RBP13.68□□□□□ -0.22
MRPS28-204ENST00000519120 ZNF503-AS2A6NEH8 195 aa13.67□□□□□ -0.22
MRPS28-204ENST00000519120 ZNF726A6NNF4 738 aa13.67□□□□□ -0.22
MRPS28-204ENST00000519120 LY6HO94772 140 aa13.67□□□□□ -0.22
MRPS28-204ENST00000519120 H2AFXP16104 143 aaPredicted RBP13.67□□□□□ -0.22
MRPS28-204ENST00000519120 NPR2P20594 1047 aa13.67□□□□□ -0.22
MRPS28-204ENST00000519120 NR4A2P43354 598 aa13.67□□□□□ -0.22
MRPS28-204ENST00000519120 GZMKP49863 264 aa13.67□□□□□ -0.22
MRPS28-204ENST00000519120 LSM11P83369 360 aaKnown RBP eCLIP13.67□□□□□ -0.22
MRPS28-204ENST00000519120 ZP4Q12836 540 aa13.67□□□□□ -0.22
MRPS28-204ENST00000519120 SELPLGQ14242 412 aa13.67□□□□□ -0.22
MRPS28-204ENST00000519120 NPTX1Q15818 432 aa13.67□□□□□ -0.22
MRPS28-204ENST00000519120 ENTPD8Q5MY95 495 aa13.67□□□□□ -0.22
MRPS28-204ENST00000519120 PHYHD1Q5SRE7 291 aa13.67□□□□□ -0.22
MRPS28-204ENST00000519120 CYB5R2Q6BCY4 276 aa13.67□□□□□ -0.22
MRPS28-204ENST00000519120 CCDC80Q76M96 950 aa13.67□□□□□ -0.22
MRPS28-204ENST00000519120 MDP1Q86V88 176 aa13.67□□□□□ -0.22
MRPS28-204ENST00000519120 MYPOPQ86VE0 399 aaPredicted RBP13.67□□□□□ -0.22
MRPS28-204ENST00000519120 C10orf53Q8N6V4 93 aa13.67□□□□□ -0.22
MRPS28-204ENST00000519120 ZNF540Q8NDQ6 660 aa13.67□□□□□ -0.22
MRPS28-204ENST00000519120 ADAMTS16Q8TE57 1224 aa13.67□□□□□ -0.22
MRPS28-204ENST00000519120 ZNF426Q9BUY5 554 aa13.67□□□□□ -0.22
MRPS28-204ENST00000519120 EMC6Q9BV81 110 aa13.67□□□□□ -0.22
MRPS28-204ENST00000519120 ULBP2Q9BZM5 246 aa13.67□□□□□ -0.22
MRPS28-204ENST00000519120 RAB1BQ9H0U4 201 aa13.67□□□□□ -0.22
MRPS28-204ENST00000519120 NPHS2Q9NP85 383 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms