RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 ABCD4O14678 606 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 PPIHO43447 177 aaKnown RBP2.65□□□□□ -1.99
VPS13B-207ENST00000518569 BCAS1O75363 584 aaPredicted RBP2.65□□□□□ -1.99
VPS13B-207ENST00000518569 SERF1AO75920 110 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 NSA2O95478 260 aaKnown RBP2.65□□□□□ -1.99
VPS13B-207ENST00000518569 ANP32DO95626 131 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 JCHAINP01591 159 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 ANXA4P09525 319 aaPredicted RBP2.65□□□□□ -1.99
VPS13B-207ENST00000518569 GOLGA8HP0CJ92 632 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 BCKDHAP12694 445 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 MLNP12872 115 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 ADRA1AP35348 466 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 FDFT1P37268 417 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 KCNJ3P48549 501 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 P2RY4P51582 365 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 RAB4BP61018 213 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 REEP5Q00765 189 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 GLO1Q04760 184 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 CAPRIN1Q14444 709 aaKnown RBP2.65□□□□□ -1.99
VPS13B-207ENST00000518569 UBE2V2Q15819 145 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 ISXQ2M1V0 245 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 HSDL1Q3SXM5 330 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 PTPN20Q4JDL3 420 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 BEX5Q5H9J7 111 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 CTSL3PQ5NE16 218 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 ATF7IP2Q5U623 682 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 ZSCAN25Q6NSZ9 544 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 WASH2PQ6VEQ5 465 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 CENPUQ71F23 418 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 Q7L0L9 218 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 NDUFAF7Q7L592 441 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 TRIM69Q86WT6 500 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 VRK2Q86Y07 508 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 RBM45Q8IUH3 476 aaKnown RBP2.65□□□□□ -1.99
VPS13B-207ENST00000518569 ZNF683Q8IZ20 524 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 LIX1Q8N485 282 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 TMEM104Q8NE00 496 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 UBA3Q8TBC4 463 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 M1APQ8TC57 530 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 LZICQ8WZA0 190 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 SLC38A4Q969I6 547 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 MCHR2Q969V1 340 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 TMA16Q96EY4 203 aaKnown RBP2.65□□□□□ -1.99
VPS13B-207ENST00000518569 PLEKHA8Q96JA3 519 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 B3GALT6Q96L58 329 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 VPS35Q96QK1 796 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 TGS1Q96RS0 853 aaKnown RBP2.65□□□□□ -1.99
VPS13B-207ENST00000518569 MRPL13Q9BYD1 178 aaKnown RBP2.65□□□□□ -1.99
VPS13B-207ENST00000518569 ANKRD60Q9BZ19 345 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 TM6SF2Q9BZW4 377 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 ROGDIQ9GZN7 287 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 DERL2Q9GZP9 239 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 COMMD4Q9H0A8 199 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 GOLPH3Q9H4A6 298 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 FBXO44Q9H4M3 255 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 NTN4Q9HB63 628 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 CSNK1G1Q9HCP0 422 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 RDH8Q9NYR8 311 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 STOX2Q9P2F5 926 aaPredicted RBP2.65□□□□□ -1.99
VPS13B-207ENST00000518569 PSMC3IPQ9P2W1 217 aaPredicted RBP2.65□□□□□ -1.99
VPS13B-207ENST00000518569 SLC2A6Q9UGQ3 507 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 KLHL21Q9UJP4 597 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 RAB23Q9ULC3 237 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 RNF6Q9Y252 685 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 PPIL1Q9Y3C6 166 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 FLVCR1Q9Y5Y0 555 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 PUS1Q9Y606 427 aaKnown RBP eCLIP2.65□□□□□ -1.99
VPS13B-207ENST00000518569 NPTNQ9Y639 398 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 GON4LQ3T8J9 2241 aa2.65□□□□□ -1.99
VPS13B-207ENST00000518569 CEP170BQ9Y4F5 1589 aaPredicted RBP2.65□□□□□ -1.99
VPS13B-207ENST00000518569 CCDC7Q96M83 1385 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 ANKRD30AQ9BXX3 1397 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 IQGAP1P46940 1657 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 ROBO1Q9Y6N7 1651 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 EPOPA6NHQ4 379 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 E5RI56 91 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 ITGB1BP1O14713 200 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 BCKDKO14874 412 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 ARPC3O15145 178 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 STX7O15400 261 aaKnown RBP2.64□□□□□ -1.99
VPS13B-207ENST00000518569 TPST2O60704 377 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 NOL4O94818 638 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 OR4F21O95013 312 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 LYPD3O95274 346 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 IFNA14P01570 189 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 HMGN1P05114 100 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 HSMCR30P0CW71 290 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 CCL2P13500 99 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 CCNB1P14635 433 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 UQCRBP14927 111 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 TSPAN8P19075 237 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 CFL1P23528 166 aaKnown RBP2.64□□□□□ -1.99
VPS13B-207ENST00000518569 HMOX2P30519 316 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 IL2RGP31785 369 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 MAGEA2P43356 314 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 CSNK1EP49674 416 aaKnown RBP2.64□□□□□ -1.99
VPS13B-207ENST00000518569 RAP1GDS1P52306 607 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 RND3P61587 244 aa2.64□□□□□ -1.99
VPS13B-207ENST00000518569 RPL32P62910 135 aaKnown RBP2.64□□□□□ -1.99
VPS13B-207ENST00000518569 CNTN2Q02246 1040 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms