RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 CBX6O95503 412 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 CPSF4O95639 269 aaKnown RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 C6orf47O95873 294 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 IGKV3-11P04433 115 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 P04436 131 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 SP1P08047 785 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 IDO1P14902 403 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 S1PR1P21453 382 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 DRD4P21917 467 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 S100A3P33764 101 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 PTGS2P35354 604 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 SOX3P41225 446 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 RFX3P48380 749 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 EMDP50402 254 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 TNFSF10P50591 281 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 HLCSP50747 726 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 ARHGDIBP52566 201 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 DGKQP52824 942 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 ATP5IP56385 69 aaPredicted RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 MRPS15P82914 257 aaKnown RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 FUT7Q11130 342 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 PPP1R8Q12972 351 aaKnown RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 ZNHIT3Q15649 155 aaPredicted RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 LSM12Q3MHD2 195 aaKnown RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 FAM174BQ3ZCQ3 159 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 ZNF385BQ569K4 471 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 DHRS7BQ6IAN0 325 aaPredicted RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 OR4F3Q6IEY1 312 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 SLC25A25Q6KCM7 469 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 ACSM6Q6P461 480 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 OPN5Q6U736 354 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 IGFL2Q6UWQ7 119 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 DLEU7Q6UYE1 221 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 PRSS45Q7RTY3 260 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 MAVSQ7Z434 540 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 WDR53Q7Z5U6 358 aaPredicted RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 ANKRD46Q86W74 232 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 LRRC34Q8IZ02 419 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 CYP4Z2PQ8N1L4 340 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 FITM2Q8N6M3 262 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 NATD1Q8N6N6 113 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 ZNF615Q8N8J6 731 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 OR7G2Q8NG99 324 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 OR4A15Q8NGL6 344 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 OR5AK3PQ8NH89 298 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 C16orf52Q8NHV5 167 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 SLC26A7Q8TE54 656 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 OR5P2Q8WZ92 322 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 TFAP2CQ92754 450 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 PNPLA2Q96AD5 504 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 COQ8BQ96D53 544 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 WDYHV1Q96HA8 205 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 LRR1Q96L50 414 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 FCRL1Q96LA6 429 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 TEX37Q96LM6 180 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 JSRP1Q96MG2 331 aaPredicted RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 SIGLEC12Q96PQ1 595 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 OR52B2Q96RD2 323 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 RASL10BQ96S79 203 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 EBF4Q9BQW3 602 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 PTDSS2Q9BVG9 487 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 HES7Q9BYE0 225 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 TRIM4Q9C037 500 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 FAM107BQ9H098 131 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 KCNK15Q9H427 330 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 CALHM2Q9HA72 323 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 ACSS1Q9NUB1 689 aaPredicted RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 ZCCHC3Q9NUD5 404 aaKnown RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 FGFR1OP2Q9NVK5 253 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 FAM120CQ9NX05 1096 aaKnown RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 ASIC5Q9NY37 505 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 TAS2R7Q9NYW3 318 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 MAT2BQ9NZL9 334 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 PDP1Q9P0J1 537 aaPredicted RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 ZNF639Q9UID6 485 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 ZNF223Q9UK11 482 aaPredicted RBP2.49□□□□□ -2.01
SKP1-204ENST00000517691 MGAT4BQ9UQ53 548 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 GAB2Q9UQC2 676 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 SLC9A8Q9Y2E8 581 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 PCM1Q15154 2024 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 BOD1L1Q8NFC6 3051 aa2.49□□□□□ -2.01
SKP1-204ENST00000517691 PTPRQQ9UMZ3 2332 aa2.48□□□□□ -2.01
SKP1-204ENST00000517691 SNRNP200O75643 2136 aaKnown RBP2.48□□□□□ -2.01
SKP1-204ENST00000517691 SCN3AQ9NY46 2000 aa2.48□□□□□ -2.01
SKP1-204ENST00000517691 SMG1Q96Q15 3661 aaKnown RBP2.48□□□□□ -2.01
SKP1-204ENST00000517691 PRSS51A0A1B0GVH4 220 aa2.48□□□□□ -2.01
SKP1-204ENST00000517691 A0A1W2PPW3 197 aa2.48□□□□□ -2.01
SKP1-204ENST00000517691 MEX3AA1L020 520 aaKnown RBP2.48□□□□□ -2.01
SKP1-204ENST00000517691 FAM90A10PA6NDY2 464 aa2.48□□□□□ -2.01
SKP1-204ENST00000517691 FAM166BA8MTA8 275 aa2.48□□□□□ -2.01
SKP1-204ENST00000517691 KLRC4-KLRK1H3BQV0 150 aa2.48□□□□□ -2.01
SKP1-204ENST00000517691 ZNF195O14628 629 aa2.48□□□□□ -2.01
SKP1-204ENST00000517691 TP53I11O14683 189 aa2.48□□□□□ -2.01
SKP1-204ENST00000517691 EMC8O43402 210 aa2.48□□□□□ -2.01
SKP1-204ENST00000517691 KCNAB3O43448 404 aa2.48□□□□□ -2.01
SKP1-204ENST00000517691 PEX1O43933 1283 aa2.48□□□□□ -2.01
SKP1-204ENST00000517691 ERN1O75460 977 aaKnown RBP2.48□□□□□ -2.01
SKP1-204ENST00000517691 NEURL1O76050 574 aa2.48□□□□□ -2.01
SKP1-204ENST00000517691 PDE9AO76083 593 aa2.48□□□□□ -2.01
SKP1-204ENST00000517691 ANP32DO95626 131 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms