RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 FAM221BA6H8Z2 402 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 TVP23AA6NH52 213 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 H3BUI4 141 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 KAT7O95251 611 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 GABRA1P14867 456 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 MAKP20794 623 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 EXOSC7Q15024 291 aaKnown RBP6.13□□□□□ -1.43
CPNE3-203ENST00000517490 CSNK1A1LQ8N752 337 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 VN1R2Q8NFZ6 395 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 OR11H4Q8NGC9 324 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 OR5M1Q8NGP8 315 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 OR2AJ1Q8NGZ0 328 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 CD300LFQ8TDQ1 290 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 FAM3DQ96BQ1 224 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 ZFYVE21Q9BQ24 234 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 SOSTQ9BQB4 213 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 TMEM106CQ9BVX2 250 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 TBL1XR1Q9BZK7 514 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 ADGRL4Q9HBW9 690 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 GMEB2Q9UKD1 530 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 C19orf53Q9UNZ5 99 aaPredicted RBP6.13□□□□□ -1.43
CPNE3-203ENST00000517490 FOXJ3Q9UPW0 622 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 CCL26Q9Y258 94 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 DICER1Q9UPY3 1922 aaKnown RBP6.13□□□□□ -1.43
CPNE3-203ENST00000517490 E9PI62 339 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 ZNF749O43361 778 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 B4GALT2O60909 372 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 AHSA1O95433 338 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 OLFM2O95897 454 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 TFPIP10646 304 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 POU3F4P49335 361 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 ARHGDIBP52566 201 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 NOGQ13253 232 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 GRM7Q14831 915 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 KIR2DS3Q14952 304 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 TUSC1Q2TAM9 212 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 H3F3CQ6NXT2 135 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 STAC2Q6ZMT1 411 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 KIAA0907Q7Z7F0 614 aaPredicted RBP6.13□□□□□ -1.43
CPNE3-203ENST00000517490 OR7G2Q8NG99 324 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 OR52B4Q8NGK2 314 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 OR4C16Q8NGL9 310 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 PXYLP1Q8TE99 480 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 SEC22AQ96IW7 307 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 CERS4Q9HA82 394 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 PRTFDC1Q9NRG1 225 aa6.13□□□□□ -1.43
CPNE3-203ENST00000517490 DCDC2BA2VCK2 349 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 OR5H14A6NHG9 310 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 C11orf98E9PRG8 122 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 BCL2L11O43521 198 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 XRCC3O43542 346 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 LPLP06858 475 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 SFTPBP07988 381 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 HNRNPA1P09651 372 aaKnown RBP eCLIP6.12□□□□□ -1.43
CPNE3-203ENST00000517490 RNH1P13489 461 aaKnown RBP6.12□□□□□ -1.43
CPNE3-203ENST00000517490 HIST1H1CP16403 213 aaKnown RBP6.12□□□□□ -1.43
CPNE3-203ENST00000517490 CNR1P21554 472 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 TLE2Q04725 743 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 ZNF273Q14593 569 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 HMGN3Q15651 99 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 KRBOX4Q5JUW0 171 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 CFAP161Q6P656 301 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 FAM111BQ6SJ93 734 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 ZNF704Q6ZNC4 412 aaPredicted RBP6.12□□□□□ -1.43
CPNE3-203ENST00000517490 STPG2Q8N412 459 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 GATSQ8NAP1 163 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 OR52R1Q8NGF1 315 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 GCDHQ92947 438 aaPredicted RBP6.12□□□□□ -1.43
CPNE3-203ENST00000517490 DVL3Q92997 716 aaPredicted RBP6.12□□□□□ -1.43
CPNE3-203ENST00000517490 PTP4A1Q93096 173 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 MICU1Q9BPX6 476 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 SLC6A17Q9H1V8 727 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 WDR76Q9H967 626 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 HAO2Q9NYQ3 351 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 PDCD11Q14690 1871 aaKnown RBP6.12□□□□□ -1.43
CPNE3-203ENST00000517490 TTC3P53804 2025 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 RLFQ13129 1914 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 TEX13DA0A0J9YY54 714 aaPredicted RBP6.12□□□□□ -1.43
CPNE3-203ENST00000517490 A6NCN8 305 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 MFSD2BA6NFX1 497 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 TMEM150CB9EJG8 249 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 NPIPA5E9PKD4 350 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 SIGLEC6O43699 453 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 LDB3O75112 727 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 FBXO24O75426 580 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 IFNA17P01571 189 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 IFNA4P05014 189 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 H2BFMP0C1H6 154 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 RPA2P15927 270 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 SPI1P17947 270 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 HTR2CP28335 458 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 UBE2IP63279 158 aaKnown RBP6.12□□□□□ -1.43
CPNE3-203ENST00000517490 GPR18Q14330 331 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 EOGTQ5NDL2 527 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 LRFN4Q6PJG9 635 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 MAMDC2Q7Z304 686 aaPredicted RBP6.12□□□□□ -1.43
CPNE3-203ENST00000517490 CMIPQ8IY22 773 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 GABRG1Q8N1C3 465 aa6.12□□□□□ -1.43
CPNE3-203ENST00000517490 RNASE11Q8TAA1 199 aaKnown RBP6.12□□□□□ -1.43
CPNE3-203ENST00000517490 MAFIPQ8WZ33 124 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms