RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 ACOT1Q86TX2 421 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 H1FOOQ8IZA3 346 aaPredicted RBP2.29□□□□□ -2.04
LINC01088-211ENST00000515597 CLDN19Q8N6F1 224 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 ARIH2OSQ8N7S6 290 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 STXBP6Q8NFX7 210 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 FAM151AQ8WW52 585 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 RDH5Q92781 318 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 PGLYRP4Q96LB8 373 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 C12orf66Q96MD2 445 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 HIST1H4GQ99525 98 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 KLHDC3Q9BQ90 382 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 NRIP2Q9BQI9 281 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 SLC35A5Q9BS91 424 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 SCRT1Q9BWW7 348 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 SPATA16Q9BXB7 569 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 CD209Q9NNX6 404 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 POLE3Q9NRF9 147 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 NUFIP1Q9UHK0 495 aaKnown RBP2.29□□□□□ -2.04
LINC01088-211ENST00000515597 NPIPA1Q9UND3 350 aa2.29□□□□□ -2.04
LINC01088-211ENST00000515597 ANKRD17O75179 2603 aaKnown RBP2.28□□□□□ -2.04
LINC01088-211ENST00000515597 MED23Q9ULK4 1368 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 ATP8B3O60423 1300 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 SF3B1O75533 1304 aaKnown RBP eCLIP2.28□□□□□ -2.044e-7■■■■□ 23.4
LINC01088-211ENST00000515597 IGHV3OR16-13A0A075B7E8 117 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 A6NDX4 124 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 G3V4G9 280 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 CXCL11O14625 94 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 MBTPS2O43462 519 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 HCRTR1O43613 425 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 TPST2O60704 377 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 FOXH1O75593 365 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 LRATO95237 230 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 CA1P00915 261 aaPredicted RBP2.28□□□□□ -2.04
LINC01088-211ENST00000515597 PRB1P04280 392 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 P04436 131 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 CCNCP24863 283 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 HPCAL1P37235 193 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 LEPP41159 167 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 HSD17B7P56937 341 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 SELENOTP62341 195 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 HTD2P86397 168 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 RIPK1Q13546 671 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 TRIM16LQ309B1 348 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 APOBEC3HQ6NTF7 200 aaKnown RBP2.28□□□□□ -2.04
LINC01088-211ENST00000515597 ZNF573Q86YE8 665 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 KIR3DL3Q8N743 410 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 FADS6Q8N9I5 356 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 Q8N9W7 124 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 SPRYD4Q8WW59 207 aaPredicted RBP2.28□□□□□ -2.04
LINC01088-211ENST00000515597 RAPGEF5Q92565 580 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 STARD4Q96DR4 205 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 SELENOIQ9C0D9 397 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 DPH5Q9H2P9 285 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 PATZ1Q9HBE1 687 aaKnown RBP2.28□□□□□ -2.04
LINC01088-211ENST00000515597 TAS2R3Q9NYW6 316 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 MTRF1LQ9UGC7 380 aaKnown RBP2.28□□□□□ -2.04
LINC01088-211ENST00000515597 TRMT112Q9UI30 125 aaKnown RBP2.28□□□□□ -2.04
LINC01088-211ENST00000515597 PHF11Q9UIL8 331 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 AURKCQ9UQB9 309 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 NEUROG3Q9Y4Z2 214 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 WSB1Q9Y6I7 421 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 WDFY3Q8IZQ1 3526 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 TICRRQ7Z2Z1 1910 aa2.28□□□□□ -2.04
LINC01088-211ENST00000515597 PTPN13Q12923 2485 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 RFX7Q2KHR2 1363 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 RALGAPA2Q2PPJ7 1873 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 SH3TC1Q8TE82 1336 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 A0A0G2JRQ6 117 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 NKX2-6A6NCS4 301 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 FAM166BA8MTA8 275 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 A8MUI8 341 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 LOC730098B7Z3J9 87 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 PPIAL4DF5H284 164 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 GFYI3L273 518 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 HIP1O00291 1037 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 RS1O15537 224 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 TRAF3IP2O43734 574 aaPredicted RBP2.27□□□□□ -2.05
LINC01088-211ENST00000515597 N4BP1O75113 896 aaKnown RBP2.27□□□□□ -2.05
LINC01088-211ENST00000515597 DIRAS3O95661 229 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 DAP3P51398 398 aaKnown RBP2.27□□□□□ -2.05
LINC01088-211ENST00000515597 SH3BGRP55822 239 aaPredicted RBP2.27□□□□□ -2.05
LINC01088-211ENST00000515597 BIDP55957 195 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 TAS2R19P59542 299 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 UNC119Q13432 240 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 MXD4Q14582 209 aaPredicted RBP2.27□□□□□ -2.05
LINC01088-211ENST00000515597 KCTD19Q17RG1 926 aaPredicted RBP2.27□□□□□ -2.05
LINC01088-211ENST00000515597 CASC10Q5T4H9 136 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 N4BP2L1Q5TBK1 243 aaPredicted RBP2.27□□□□□ -2.05
LINC01088-211ENST00000515597 C11orf71Q6IPW1 123 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 FAM71F2Q6NXP2 309 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 COPS6Q7L5N1 327 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 MOB3BQ86TA1 216 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 PNKDQ8N490 385 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 ATP6V0D2Q8N8Y2 350 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 NKAPP1Q8N9T2 125 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 OR51S1Q8NGJ8 323 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 OR10T2Q8NGX3 314 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 OR56B4Q8NH76 319 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 ZNF721Q8TF20 911 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 ST8SIA1Q92185 356 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms