RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 C21orf62-AS1Q17RA5 79 aa11.74□□□□□ -0.53
SMAD1-215ENST00000515385 OR10K2Q6IF99 312 aa11.74□□□□□ -0.53
SMAD1-215ENST00000515385 ARHGAP11AQ6P4F7 1023 aa11.74□□□□□ -0.53
SMAD1-215ENST00000515385 ANKRD16Q6P6B7 361 aa11.74□□□□□ -0.53
SMAD1-215ENST00000515385 ZNF227Q86WZ6 799 aa11.74□□□□□ -0.53
SMAD1-215ENST00000515385 SLC35F2Q8IXU6 374 aa11.74□□□□□ -0.53
SMAD1-215ENST00000515385 WFDC5Q8TCV5 224 aa11.74□□□□□ -0.53
SMAD1-215ENST00000515385 WBP2Q969T9 261 aa11.74□□□□□ -0.53
SMAD1-215ENST00000515385 ZNF426Q9BUY5 554 aa11.74□□□□□ -0.53
SMAD1-215ENST00000515385 SEMA6CQ9H3T2 930 aa11.74□□□□□ -0.53
SMAD1-215ENST00000515385 DZANK1Q9NVP4 752 aa11.74□□□□□ -0.53
SMAD1-215ENST00000515385 PPP4R1LQ9P1A2 415 aa11.74□□□□□ -0.53
SMAD1-215ENST00000515385 GNG8Q9UK08 70 aa11.74□□□□□ -0.53
SMAD1-215ENST00000515385 YBX2Q9Y2T7 364 aaKnown RBP11.74□□□□□ -0.53
SMAD1-215ENST00000515385 TEX13DA0A0J9YY54 714 aaPredicted RBP11.73□□□□□ -0.53
SMAD1-215ENST00000515385 ZNF705EA8MWA4 302 aaPredicted RBP11.73□□□□□ -0.53
SMAD1-215ENST00000515385 MFNGO00587 321 aa11.73□□□□□ -0.53
SMAD1-215ENST00000515385 TMPRSS11DO60235 418 aa11.73□□□□□ -0.53
SMAD1-215ENST00000515385 TBX6O95947 436 aaPredicted RBP11.73□□□□□ -0.53
SMAD1-215ENST00000515385 CD14P08571 375 aa11.73□□□□□ -0.53
SMAD1-215ENST00000515385 MAKP20794 623 aa11.73□□□□□ -0.53
SMAD1-215ENST00000515385 PRSS3P35030 304 aa11.73□□□□□ -0.53
SMAD1-215ENST00000515385 RPS15P62841 145 aaKnown RBP11.73□□□□□ -0.53
SMAD1-215ENST00000515385 C9orf131Q5VYM1 1079 aa11.73□□□□□ -0.53
SMAD1-215ENST00000515385 STAC2Q6ZMT1 411 aa11.73□□□□□ -0.53
SMAD1-215ENST00000515385 DMRTC2Q8IXT2 367 aaPredicted RBP11.73□□□□□ -0.53
SMAD1-215ENST00000515385 LILRA3Q8N6C8 439 aaPredicted RBP11.73□□□□□ -0.53
SMAD1-215ENST00000515385 TMEM229BQ8NBD8 167 aa11.73□□□□□ -0.53
SMAD1-215ENST00000515385 CHST14Q8NCH0 376 aa11.73□□□□□ -0.53
SMAD1-215ENST00000515385 PPP1R1CQ8WVI7 109 aa11.73□□□□□ -0.53
SMAD1-215ENST00000515385 NUDCD2Q8WVJ2 157 aa11.73□□□□□ -0.53
SMAD1-215ENST00000515385 TMEM239Q8WW34 195 aa11.73□□□□□ -0.53
SMAD1-215ENST00000515385 SCAMP4Q969E2 229 aa11.73□□□□□ -0.53
SMAD1-215ENST00000515385 MRPL38Q96DV4 380 aaKnown RBP11.73□□□□□ -0.53
SMAD1-215ENST00000515385 PDCD1LG2Q9BQ51 273 aa11.73□□□□□ -0.53
SMAD1-215ENST00000515385 PRSS27Q9BQR3 290 aa11.73□□□□□ -0.53
SMAD1-215ENST00000515385 GGACTQ9BVM4 153 aa11.73□□□□□ -0.53
SMAD1-215ENST00000515385 ADAM19Q9H013 955 aa11.73□□□□□ -0.53
SMAD1-215ENST00000515385 TOLLIPQ9H0E2 274 aa11.73□□□□□ -0.53
SMAD1-215ENST00000515385 RHOFQ9HBH0 211 aa11.73□□□□□ -0.53
SMAD1-215ENST00000515385 C2orf42Q9NWW7 574 aa11.73□□□□□ -0.53
SMAD1-215ENST00000515385 ZNF107Q9UII5 783 aaPredicted RBP11.73□□□□□ -0.53
SMAD1-215ENST00000515385 SIGLEC7Q9Y286 467 aa11.73□□□□□ -0.53
SMAD1-215ENST00000515385 ZNF443Q9Y2A4 671 aaPredicted RBP11.73□□□□□ -0.53
SMAD1-215ENST00000515385 METTL21EPA6NDL7 271 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 RNASEK-C17orf49H0YIS7 233 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 NDUFS4O43181 175 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 FARS2O95363 451 aaKnown RBP11.72□□□□□ -0.53
SMAD1-215ENST00000515385 SLC34A2O95436 690 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 AGR2O95994 175 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 CTSLP07711 333 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 OR8U8P0C7N1 319 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 MUC1P15941 1255 aaPredicted RBP11.72□□□□□ -0.53
SMAD1-215ENST00000515385 TIMP2P16035 220 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 GLP1RP43220 463 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 GABREP78334 506 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 PRKCZQ05513 592 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 TOMM20Q15388 145 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 DNLZQ5SXM8 178 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 TMEM220Q6QAJ8 160 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 TMEM205Q6UW68 189 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 CARFQ8N187 725 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 OR2L13Q8N349 312 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 CLEC1AQ8NC01 280 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 OR4K14Q8NGD5 310 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 ING5Q8WYH8 240 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 OTUB2Q96DC9 234 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 ELF4Q99607 663 aaPredicted RBP11.72□□□□□ -0.53
SMAD1-215ENST00000515385 CDC6Q99741 560 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 LGR4Q9BXB1 951 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 MTHFD2LQ9H903 347 aaPredicted RBP11.72□□□□□ -0.53
SMAD1-215ENST00000515385 SLC17A5Q9NRA2 495 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 CLDND1Q9NY35 253 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 CDV3Q9UKY7 258 aaKnown RBP11.72□□□□□ -0.53
SMAD1-215ENST00000515385 NTNG1Q9Y2I2 539 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 KPTNQ9Y664 436 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 DUXAA6NLW8 204 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 P2RX6O15547 441 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 PPP1R3DO95685 299 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 CD2P06729 351 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 SFTA3P0C7M3 94 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 MPIP34949 423 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 ALKBH1Q13686 389 aaKnown RBP11.72□□□□□ -0.53
SMAD1-215ENST00000515385 ZNF658BQ4V348 819 aaPredicted RBP11.72□□□□□ -0.53
SMAD1-215ENST00000515385 BEX5Q5H9J7 111 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 AWAT2Q6E213 333 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 GDF6Q6KF10 455 aaPredicted RBP11.72□□□□□ -0.53
SMAD1-215ENST00000515385 LRRTM4Q86VH4 590 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 C17orf64Q86WR6 236 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 GABRG1Q8N1C3 465 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 GALNT16Q8N428 558 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 GLYATL1Q969I3 302 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 ZBTB8AQ96BR9 441 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 WDR77Q9BQA1 342 aaPredicted RBP11.72□□□□□ -0.53
SMAD1-215ENST00000515385 LHX9Q9NQ69 397 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 WBP1LQ9NX94 342 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 LPAR3Q9UBY5 353 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 STEAP1Q9UHE8 339 aa11.72□□□□□ -0.53
SMAD1-215ENST00000515385 NOP16Q9Y3C1 178 aaKnown RBP11.72□□□□□ -0.53
SMAD1-215ENST00000515385 KCNE3Q9Y6H6 103 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms