RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 KRCC1Q9NPI7 259 aaPredicted RBP6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 COMMD3Q9UBI1 195 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 TPRKBQ9Y3C4 175 aa6.87□□□□□ -1.31
PDLIM5-219ENST00000514743 LINC01553A4QN01 128 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 C5orf67F2Z3F1 127 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 NPIPB9F8W1W9 429 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 SAP18O00422 153 aaKnown RBP6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 KLF4O43474 513 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 PRNPP04156 253 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 C1GALT1C1LP0DN25 315 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 PAX1P15863 534 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 BMP7P18075 431 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 CD72P21854 359 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 CTSSP25774 331 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 FHITP49789 147 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 ZNF616Q08AN1 781 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 TSTA3Q13630 321 aaPredicted RBP6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 HNRNPA1L2Q32P51 320 aaKnown RBP6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 IER5LQ5T953 404 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 FAM71E1Q6IPT2 247 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 TMEM200AQ86VY9 491 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 TRAPPC5Q8IUR0 188 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 CPOQ8IVL8 374 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 ARMC10Q8N2F6 343 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 OR4A15Q8NGL6 344 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 ELMOD3Q96FG2 381 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 THOC3Q96J01 351 aaKnown RBP6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 PITX2Q99697 317 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 OR52A5Q9H2C5 316 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 DUSP21Q9H596 190 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 MKKSQ9NPJ1 570 aaPredicted RBP6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 RBM7Q9Y580 266 aaKnown RBP6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 MRPS18BQ9Y676 258 aaKnown RBP6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 SLCO1B1Q9Y6L6 691 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 SNRNP200O75643 2136 aaKnown RBP6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 KIAA0100Q14667 2235 aaKnown RBP6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 A0A0A6YYH2 397 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 EDDM13A0A1B0GTR0 161 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 A6NJ64 397 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 COLCA2A8K830 154 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 SEMA7AO75326 666 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 IFNA17P01571 189 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 MELTFP08582 738 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 RAB6AP20340 208 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 GZMHP20718 246 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 AGAP20933 346 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 RBM34P42696 430 aaKnown RBP6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 NPBWR1P48145 328 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 SRP9P49458 86 aaKnown RBP6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 LUMP51884 338 aaPredicted RBP6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 PNLIPRP1P54315 467 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 DCDP81605 110 aaKnown RBP6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 ATP6V1FQ16864 119 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 DNLZQ5SXM8 178 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 H3F3CQ6NXT2 135 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 KMT5CQ86Y97 462 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 LAX1Q8IWV1 398 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 MMP21Q8N119 569 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 PXT1Q8NFP0 134 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 OR2L2Q8NH16 312 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 TERB2Q8NHR7 220 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 BADQ92934 168 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 HGDQ93099 445 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 COX14Q96I36 57 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 NECAB3Q96P71 396 aaPredicted RBP6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 DIRC2Q96SL1 478 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 EPYCQ99645 322 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 URM1Q9BTM9 101 aaKnown RBP6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 ACOT13Q9NPJ3 140 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 ING1Q9UK53 422 aaPredicted RBP6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 ACSL6Q9UKU0 697 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 SLC7A11Q9UPY5 501 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 DOCK8Q8NF50 2099 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 TRPM6Q9BX84 2022 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 LOC102723532A0A0G2JNH3 316 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 A0A1B0GVI7 797 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 PRAMEF27A3QJZ7 478 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 CPED1A4D0V7 1026 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 MGAT4DA6NG13 374 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 A6NLC8 198 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 HEPACAM2A8MVW5 462 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 PRAMEF26H0Y7S4 382 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 M0R129 80 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 RP2O75695 350 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 TGFB1P01137 390 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 VIPP01282 170 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 OPN1SWP03999 348 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 ERGP11308 486 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 ETFAP13804 333 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 SERPINA2P20848 420 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 CD82P27701 267 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 LIMS1P48059 325 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 RPL19P84098 196 aaKnown RBP6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 SORDQ00796 357 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 ZNF234Q14588 700 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 MAD2L1BPQ15013 274 aaPredicted RBP6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 TMEM52BQ4KMG9 183 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 PRAMEF5Q5TYX0 476 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 PRAMEF6Q5VXH4 476 aa6.86□□□□□ -1.31
PDLIM5-219ENST00000514743 FAM129CQ86XR2 697 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms