RNA–Protein interactions for RNA: ENST00000513944.5

TNPO1-209, Transcript of transportin 1, human

TSL 4

Gene TNPO1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNPO1-209	ENST00000513944	CLDN16	Q9Y5I7	305 aa		2.59	□□□□□ -1.99
TNPO1-209	ENST00000513944	ORC6	Q9Y5N6	252 aa		2.59	□□□□□ -1.99
TNPO1-209	ENST00000513944	MAGED1	Q9Y5V3	778 aa	Predicted RBP	2.59	□□□□□ -1.99
TNPO1-209	ENST00000513944	ATG2B	Q96BY7	2078 aa		2.59	□□□□□ -2
TNPO1-209	ENST00000513944	DOCK9	Q9BZ29	2069 aa		2.59	□□□□□ -2
TNPO1-209	ENST00000513944	BRWD1	Q9NSI6	2320 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	TRBV4-1	A0A0J9YWV2	114 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	IGHV5-10-1	A0A0J9YXX1	117 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	SYNDIG1L	A6NDD5	238 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	FRG2C	A6NGY1	282 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	FAM157A	C9JC47	383 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	TNFRSF11B	O00300	401 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	FAAH	O00519	579 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	AP3D1	O14617	1153 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	MITF	O75030	526 aa	Predicted RBP	2.58	□□□□□ -2
TNPO1-209	ENST00000513944	STX11	O75558	287 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	SCRG1	O75711	98 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	ACTL6B	O94805	426 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	CCNB2	O95067	398 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	NKX2-2	O95096	273 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	SOX14	O95416	240 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	OXSR1	O95747	527 aa	Predicted RBP	2.58	□□□□□ -2
TNPO1-209	ENST00000513944	CLPS	P04118	112 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	IGKV3-11	P04433	115 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	IFNA16	P05015	189 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	H1F0	P07305	194 aa	Known RBP	2.58	□□□□□ -2
TNPO1-209	ENST00000513944	PABPC4L	P0CB38	370 aa	Known RBP	2.58	□□□□□ -2
TNPO1-209	ENST00000513944	SLC35E2	P0CK97	266 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	ATP6V1B1	P15313	513 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	ELAVL4	P26378	380 aa	Known RBP	2.58	□□□□□ -2
TNPO1-209	ENST00000513944	SSTR2	P30874	369 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	MAP3K8	P41279	467 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	YAP1	P46937	504 aa	Known RBP	2.58	□□□□□ -2
TNPO1-209	ENST00000513944	OR1D4	P47884	311 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	RFX3	P48380	749 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	DUSP3	P51452	185 aa	Predicted RBP	2.58	□□□□□ -2
TNPO1-209	ENST00000513944	ARHGDIA	P52565	204 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	EFNA3	P52797	238 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	UGT2B15	P54855	530 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	NUP107	P57740	925 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	TAS2R41	P59536	307 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	BTG2	P78543	158 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	ADARB1	P78563	741 aa	Known RBP	2.58	□□□□□ -2
TNPO1-209	ENST00000513944	CCL7	P80098	99 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	IL1RL1	Q01638	556 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	IL18R1	Q13478	541 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	TRA2A	Q13595	282 aa	Known RBP eCLIP	2.58	□□□□□ -2
TNPO1-209	ENST00000513944	RAPSN	Q13702	412 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	EBP	Q15125	230 aa	Known RBP	2.58	□□□□□ -2
TNPO1-209	ENST00000513944	NPTX1	Q15818	432 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	DUSP7	Q16829	419 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	EXOC3L2	Q2M3D2	409 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	ARHGAP11B	Q3KRB8	267 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	SLC36A3	Q495N2	470 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	TRMT12	Q53H54	448 aa	Known RBP	2.58	□□□□□ -2
TNPO1-209	ENST00000513944	ZNF311	Q5JNZ3	666 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	MRPL2	Q5T653	305 aa	Known RBP	2.58	□□□□□ -2
TNPO1-209	ENST00000513944	C1orf189	Q5VU69	101 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	ZNF691	Q5VV52	312 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	KDM4D	Q6B0I6	523 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	TMEM154	Q6P9G4	183 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	ZCCHC12	Q6PEW1	402 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	TTC33	Q6PID6	262 aa	Predicted RBP	2.58	□□□□□ -2
TNPO1-209	ENST00000513944	FAM198B	Q6UWH4	519 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	NPSR1	Q6W5P4	371 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	DGAT2L6	Q6ZPD8	337 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	LANCL3	Q6ZV70	420 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	ARHGAP22	Q7Z5H3	698 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	TMEM179B	Q7Z7N9	219 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	RANBP3L	Q86VV4	465 aa	Predicted RBP	2.58	□□□□□ -2
TNPO1-209	ENST00000513944	CYP4Z1	Q86W10	505 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	PRSS58	Q8IYP2	241 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	ZNF786	Q8N393	782 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	PARP8	Q8N3A8	854 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	ZNF614	Q8N883	585 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	ZNF441	Q8N8Z8	693 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	AQP11	Q8NBQ7	271 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	SETD9	Q8NE22	299 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	ZNF555	Q8NEP9	628 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	OR4K5	Q8NGD3	323 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	OR4D11	Q8NGI4	311 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	OR6T1	Q8NGN1	323 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	OR52P1P	Q8NH57	321 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	OR52J3	Q8NH60	311 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	FAM81A	Q8TBF8	368 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	GPR151	Q8TDV0	419 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	ADAMTS16	Q8TE57	1224 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	GIPC3	Q8TF64	312 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	PIK3R3	Q92569	461 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	RIT1	Q92963	219 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	NRBF2	Q96F24	287 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	CNDP2	Q96KP4	475 aa	Known RBP	2.58	□□□□□ -2
TNPO1-209	ENST00000513944	ART5	Q96L15	291 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	ZNF578	Q96N58	590 aa	Predicted RBP	2.58	□□□□□ -2
TNPO1-209	ENST00000513944	OR6C1	Q96RD1	312 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	GAL3ST4	Q96RP7	486 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	ARHGDIG	Q99819	225 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	LMF2	Q9BU23	707 aa	Known RBP	2.58	□□□□□ -2
TNPO1-209	ENST00000513944	EDEM2	Q9BV94	578 aa		2.58	□□□□□ -2
TNPO1-209	ENST00000513944	RSPO3	Q9BXY4	272 aa	Predicted RBP	2.58	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms