RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 ZNF701Q9NV72 531 aaPredicted RBP8.5□□□□□ -1.05
RNF4-221ENST00000513643 UPB1Q9UBR1 384 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 ITGB1BP2Q9UKP3 347 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 RNF115Q9Y4L5 304 aa8.5□□□□□ -1.05
RNF4-221ENST00000513643 DSCAMO60469 2012 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 CIB4A0PJX0 185 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 SLC35F4A4IF30 521 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 NPIPB13A6NJU9 1138 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 NPIPB4C9JG80 1138 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 SLC43A1O75387 559 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 SERPINA1P01009 418 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 IGLV1-44P01699 117 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 PTNP21246 168 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 PAX7P23759 505 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 CD40P25942 277 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 ZNF133P52736 654 aaPredicted RBP8.49□□□□□ -1.05
RNF4-221ENST00000513643 SH3BGRP55822 239 aaPredicted RBP8.49□□□□□ -1.05
RNF4-221ENST00000513643 TAS2R41P59536 307 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 ADAM8P78325 824 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 ST3GAL3Q11203 375 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 KEAP1Q14145 624 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 HIST3H3Q16695 136 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 PGGHGQ32M88 737 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 C3orf36Q3SXR2 165 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 TBRG1Q3YBR2 411 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 ZNF672Q499Z4 452 aaPredicted RBP8.49□□□□□ -1.05
RNF4-221ENST00000513643 IFI44LQ53G44 452 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 FBXW10Q5XX13 1052 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 GLYATQ6IB77 296 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 ANKRD16Q6P6B7 361 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 DEF8Q6ZN54 512 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 UEVLDQ8IX04 471 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 FAM156AQ8NDB6 213 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 PIK3C3Q8NEB9 887 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 OR52N5Q8NH56 324 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 PFN4Q8NHR9 129 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 GEMIN6Q8WXD5 167 aaKnown RBP8.49□□□□□ -1.05
RNF4-221ENST00000513643 LZICQ8WZA0 190 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 AKAP1Q92667 903 aaKnown RBP eCLIP8.49□□□□□ -1.05
RNF4-221ENST00000513643 TMEM54Q969K7 222 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 PIGTQ969N2 578 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 TPD52L3Q96J77 140 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 RADILQ96JH8 1075 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 HSH2DQ96JZ2 352 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 DHRS1Q96LJ7 313 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 ZNF75AQ96N20 296 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 KCTD14Q9BQ13 255 aaPredicted RBP8.49□□□□□ -1.05
RNF4-221ENST00000513643 FUZQ9BT04 418 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 MRPL13Q9BYD1 178 aaKnown RBP8.49□□□□□ -1.05
RNF4-221ENST00000513643 NANSQ9NR45 359 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 DLL4Q9NR61 685 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 MED29Q9NX70 200 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 NDUFAF4Q9P032 175 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 ADAM21Q9UKJ8 722 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 AMDHD2Q9Y303 409 aa8.49□□□□□ -1.05
RNF4-221ENST00000513643 CSPG4Q6UVK1 2322 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 A0A087WUU8 490 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 A0A1W2PRQ8 180 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 ZNF587BE7ETH6 402 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 J3KTA2 159 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 OR7A10O76100 309 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 IGKV3-15P01624 115 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 CD8AP01732 235 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 IFNW1P05000 195 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 CD3EP07766 207 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 NCK1P16333 377 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 FUT1P19526 365 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 PTAFRP25105 342 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 GTF2E2P29084 291 aaKnown RBP8.48□□□□□ -1.05
RNF4-221ENST00000513643 PRPS1P60891 318 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 RPS4XP62701 263 aaKnown RBP8.48□□□□□ -1.05
RNF4-221ENST00000513643 ARF1P84077 181 aaKnown RBP8.48□□□□□ -1.05
RNF4-221ENST00000513643 ROR2Q01974 943 aaKnown RBP8.48□□□□□ -1.05
RNF4-221ENST00000513643 POU3F1Q03052 451 aaPredicted RBP8.48□□□□□ -1.05
RNF4-221ENST00000513643 PRKCDQ05655 676 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 C1DQ13901 141 aaKnown RBP8.48□□□□□ -1.05
RNF4-221ENST00000513643 DGCR6Q14129 220 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 HIKESHIQ53FT3 197 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 SAMD4BQ5PRF9 694 aaKnown RBP8.48□□□□□ -1.05
RNF4-221ENST00000513643 C9orf135Q5VTT2 229 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 LRFN4Q6PJG9 635 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 PRSS57Q6UWY2 283 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 TMEM108Q6UXF1 575 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 DTX2Q86UW9 622 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 TGIF2LYQ8IUE0 185 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 RNF113BQ8IZP6 322 aaKnown RBP8.48□□□□□ -1.05
RNF4-221ENST00000513643 FAM86B1Q8N7N1 296 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 LRRC75AQ8NAA5 344 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 RNF217Q8TC41 542 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 NEUROG1Q92886 237 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 NMD3Q96D46 503 aaKnown RBP8.48□□□□□ -1.05
RNF4-221ENST00000513643 ADAD1Q96M93 576 aaKnown RBP8.48□□□□□ -1.05
RNF4-221ENST00000513643 ALKBH3Q96Q83 286 aaPredicted RBP8.48□□□□□ -1.05
RNF4-221ENST00000513643 CDRT15Q96T59 188 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 EMC6Q9BV81 110 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 GSX2Q9BZM3 304 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 ANKRD19PQ9H560 264 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 CRLF2Q9HC73 371 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 B3GNT2Q9NY97 397 aa8.48□□□□□ -1.05
RNF4-221ENST00000513643 EGFL7Q9UHF1 273 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms