RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 ARMCX1Q9P291 453 aa11.97□□□□□ -0.49
SPCS3-204ENST00000513139 REV1Q9UBZ9 1251 aa11.97□□□□□ -0.49
SPCS3-204ENST00000513139 PRDM4Q9UKN5 801 aa11.97□□□□□ -0.49
SPCS3-204ENST00000513139 ARHGAP32A7KAX9 2087 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 LOC105371242A0A075B767 164 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 A0A096LPE4 126 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 A0A1W2PPZ6 126 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 ZC3H12DA2A288 527 aaKnown RBP11.96□□□□□ -0.49
SPCS3-204ENST00000513139 RPL36A-HNRNPH2H7BZ11 118 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 RNASET2O00584 256 aaKnown RBP11.96□□□□□ -0.49
SPCS3-204ENST00000513139 AKR7A3O95154 331 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 AVPP01185 164 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 C1QCP02747 245 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 IL6P05231 212 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 CELA3BP08861 270 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 NR4A1P22736 598 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 COL8A2P25067 703 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 TACR3P29371 465 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 SOAT1P35610 550 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 CDKN2CP42773 168 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 SELENOPP49908 381 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 UBA52P62987 128 aaKnown RBP11.96□□□□□ -0.49
SPCS3-204ENST00000513139 MYBPC1Q00872 1141 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 PLAURQ03405 335 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 SNTB2Q13425 540 aaKnown RBP11.96□□□□□ -0.49
SPCS3-204ENST00000513139 CEACAM7Q14002 265 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 DPY19L1Q2PZI1 675 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 MIDNQ504T8 468 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 ANXA8L1Q5VT79 327 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 CREB3L2Q70SY1 520 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 LINGO2Q7L985 606 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 OLIG3Q7RTU3 272 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 CARM1Q86X55 608 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 CMIPQ8IY22 773 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 CCDC36Q8IYA8 594 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 OR4A15Q8NGL6 344 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 SLC35G5Q96KT7 338 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 NARFLQ9H6Q4 476 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 NTN4Q9HB63 628 aa11.96□□□□□ -0.49
SPCS3-204ENST00000513139 WNK1Q9H4A3 2382 aa11.96□□□□□ -0.5
SPCS3-204ENST00000513139 TMEM229AB2RXF0 380 aa11.95□□□□□ -0.5
SPCS3-204ENST00000513139 J3QLI3 93 aa11.95□□□□□ -0.5
SPCS3-204ENST00000513139 WNT9BO14905 357 aa11.95□□□□□ -0.5
SPCS3-204ENST00000513139 HPXP02790 462 aa11.95□□□□□ -0.5
SPCS3-204ENST00000513139 GSNP06396 782 aa11.95□□□□□ -0.5
SPCS3-204ENST00000513139 ROR2Q01974 943 aaKnown RBP11.95□□□□□ -0.5
SPCS3-204ENST00000513139 KLF10Q13118 480 aa11.95□□□□□ -0.5
SPCS3-204ENST00000513139 OR7A5Q15622 319 aa11.95□□□□□ -0.5
SPCS3-204ENST00000513139 ACSM5Q6NUN0 579 aa11.95□□□□□ -0.5
SPCS3-204ENST00000513139 SLC2A7Q6PXP3 512 aa11.95□□□□□ -0.5
SPCS3-204ENST00000513139 FRRS1Q6ZNA5 592 aa11.95□□□□□ -0.5
SPCS3-204ENST00000513139 BPIFB2Q8N4F0 458 aa11.95□□□□□ -0.5
SPCS3-204ENST00000513139 VPS37AQ8NEZ2 397 aa11.95□□□□□ -0.5
SPCS3-204ENST00000513139 NANPQ8TBE9 248 aa11.95□□□□□ -0.5
SPCS3-204ENST00000513139 ROPN1LQ96C74 230 aa11.95□□□□□ -0.5
SPCS3-204ENST00000513139 ZG16BQ96DA0 208 aa11.95□□□□□ -0.5
SPCS3-204ENST00000513139 SPDL1Q96EA4 605 aa11.95□□□□□ -0.5
SPCS3-204ENST00000513139 CCDC115Q96NT0 180 aa11.95□□□□□ -0.5
SPCS3-204ENST00000513139 SLC6A7Q99884 636 aa11.95□□□□□ -0.5
SPCS3-204ENST00000513139 ZNF416Q9BWM5 594 aa11.95□□□□□ -0.5
SPCS3-204ENST00000513139 TMPRSS13Q9BYE2 586 aa11.95□□□□□ -0.5
SPCS3-204ENST00000513139 OR51I1Q9H343 314 aa11.95□□□□□ -0.5
SPCS3-204ENST00000513139 NOX3Q9HBY0 568 aa11.95□□□□□ -0.5
SPCS3-204ENST00000513139 ZNF275Q9NSD4 429 aaPredicted RBP11.95□□□□□ -0.5
SPCS3-204ENST00000513139 SLC6A13Q9NSD5 602 aa11.95□□□□□ -0.5
SPCS3-204ENST00000513139 DDX28Q9NUL7 540 aaKnown RBP11.95□□□□□ -0.5
SPCS3-204ENST00000513139 BTNL2Q9UIR0 455 aa11.95□□□□□ -0.5
SPCS3-204ENST00000513139 CMYA5Q8N3K9 4069 aa11.95□□□□□ -0.5
SPCS3-204ENST00000513139 A0A0G2JMP0 313 aa11.94□□□□□ -0.5
SPCS3-204ENST00000513139 A0A0X1KG70 313 aa11.94□□□□□ -0.5
SPCS3-204ENST00000513139 RNF103-CHMP3A0A140T963 221 aa11.94□□□□□ -0.5
SPCS3-204ENST00000513139 CCDC154A6NI56 674 aa11.94□□□□□ -0.5
SPCS3-204ENST00000513139 AP3D1O14617 1153 aa11.94□□□□□ -0.5
SPCS3-204ENST00000513139 PPIHO43447 177 aaKnown RBP11.94□□□□□ -0.5
SPCS3-204ENST00000513139 UPK3AO75631 287 aa11.94□□□□□ -0.5
SPCS3-204ENST00000513139 FAM107AO95990 144 aa11.94□□□□□ -0.5
SPCS3-204ENST00000513139 UQCRBP14927 111 aa11.94□□□□□ -0.5
SPCS3-204ENST00000513139 P2RY4P51582 365 aa11.94□□□□□ -0.5
SPCS3-204ENST00000513139 OCLNQ16625 522 aa11.94□□□□□ -0.5
SPCS3-204ENST00000513139 PAGE3Q5JUK9 113 aa11.94□□□□□ -0.5
SPCS3-204ENST00000513139 KRT80Q6KB66 452 aa11.94□□□□□ -0.5
SPCS3-204ENST00000513139 NIPAL3Q6P499 406 aa11.94□□□□□ -0.5
SPCS3-204ENST00000513139 OR4M2Q8NGB6 313 aa11.94□□□□□ -0.5
SPCS3-204ENST00000513139 XAGE5Q8WWM1 108 aa11.94□□□□□ -0.5
SPCS3-204ENST00000513139 CNOT9Q92600 299 aaKnown RBP11.94□□□□□ -0.5
SPCS3-204ENST00000513139 MRPL37Q9BZE1 423 aaKnown RBP11.94□□□□□ -0.5
SPCS3-204ENST00000513139 CRLF2Q9HC73 371 aa11.94□□□□□ -0.5
SPCS3-204ENST00000513139 RASD1Q9Y272 281 aa11.94□□□□□ -0.5
SPCS3-204ENST00000513139 ARL2BPQ9Y2Y0 163 aa11.94□□□□□ -0.5
SPCS3-204ENST00000513139 LOC100653049A0A140TA62 436 aa11.93□□□□□ -0.5
SPCS3-204ENST00000513139 CLDN24A6NM45 220 aa11.93□□□□□ -0.5
SPCS3-204ENST00000513139 CCDC22O60826 627 aa11.93□□□□□ -0.5
SPCS3-204ENST00000513139 RP2O75695 350 aa11.93□□□□□ -0.5
SPCS3-204ENST00000513139 KRT34O76011 436 aa11.93□□□□□ -0.5
SPCS3-204ENST00000513139 OR12D1P0DN82 309 aa11.93□□□□□ -0.5
SPCS3-204ENST00000513139 ARAFP10398 606 aa11.93□□□□□ -0.5
SPCS3-204ENST00000513139 GATA3P23771 443 aa11.93□□□□□ -0.5
SPCS3-204ENST00000513139 CXCR1P25024 350 aa11.93□□□□□ -0.5
SPCS3-204ENST00000513139 FPR2P25090 351 aa11.93□□□□□ -0.5
SPCS3-204ENST00000513139 GLRXP35754 106 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms