RNA–Protein interactions for RNA: ENST00000513060.5

RACK1-230, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 1,651 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-230ENST00000513060 ZNF716A6NP11 495 aa12.16□□□□□ -0.46
RACK1-230ENST00000513060 PRRG2O14669 202 aa12.16□□□□□ -0.46
RACK1-230ENST00000513060 TRAF3IP2O43734 574 aaPredicted RBP12.16□□□□□ -0.46
RACK1-230ENST00000513060 IDH3BO43837 385 aa12.16□□□□□ -0.46
RACK1-230ENST00000513060 WDR1O75083 606 aa12.16□□□□□ -0.46
RACK1-230ENST00000513060 BCL10O95999 233 aa12.16□□□□□ -0.46
RACK1-230ENST00000513060 HMGN1P05114 100 aa12.16□□□□□ -0.46
RACK1-230ENST00000513060 SDHAP31040 664 aa12.16□□□□□ -0.46
RACK1-230ENST00000513060 CDC42P60953 191 aa12.16□□□□□ -0.46
RACK1-230ENST00000513060 RPL27P61353 136 aaKnown RBP12.16□□□□□ -0.46
RACK1-230ENST00000513060 RBPJQ06330 500 aa12.16□□□□□ -0.46
RACK1-230ENST00000513060 POU4F3Q15319 338 aa12.16□□□□□ -0.46
RACK1-230ENST00000513060 SF3B4Q15427 424 aaKnown RBP eCLIP12.16□□□□□ -0.463e-7■■■■■ 73.7
RACK1-230ENST00000513060 SNAPC1Q16533 368 aa12.16□□□□□ -0.46
RACK1-230ENST00000513060 EEF1A1P5Q5VTE0 462 aa12.16□□□□□ -0.46
RACK1-230ENST00000513060 GTF2IRD2BQ6EKJ0 949 aa12.16□□□□□ -0.46
RACK1-230ENST00000513060 RPTNQ6XPR3 784 aa12.16□□□□□ -0.46
RACK1-230ENST00000513060 CREB3L2Q70SY1 520 aa12.16□□□□□ -0.46
RACK1-230ENST00000513060 P4HA3Q7Z4N8 544 aa12.16□□□□□ -0.46
RACK1-230ENST00000513060 GTF2IRD2Q86UP8 949 aa12.16□□□□□ -0.46
RACK1-230ENST00000513060 CCDC71Q8IV32 467 aaPredicted RBP12.16□□□□□ -0.46
RACK1-230ENST00000513060 FAM81AQ8TBF8 368 aa12.16□□□□□ -0.46
RACK1-230ENST00000513060 UBE2FQ969M7 185 aa12.16□□□□□ -0.46
RACK1-230ENST00000513060 RASD2Q96D21 266 aa12.16□□□□□ -0.46
RACK1-230ENST00000513060 CALHM2Q9HA72 323 aa12.16□□□□□ -0.46
RACK1-230ENST00000513060 KLHL9Q9P2J3 617 aa12.16□□□□□ -0.46
RACK1-230ENST00000513060 ING1Q9UK53 422 aaPredicted RBP12.16□□□□□ -0.46
RACK1-230ENST00000513060 ZNF835Q9Y2P0 537 aa12.16□□□□□ -0.46
RACK1-230ENST00000513060 LRRC42Q9Y546 428 aa12.16□□□□□ -0.46
RACK1-230ENST00000513060 TEX13CA0A0J9YWL9 993 aa12.15□□□□□ -0.46
RACK1-230ENST00000513060 M0R129 80 aa12.15□□□□□ -0.46
RACK1-230ENST00000513060 SURF4O15260 269 aa12.15□□□□□ -0.46
RACK1-230ENST00000513060 SLC2A10O95528 541 aa12.15□□□□□ -0.46
RACK1-230ENST00000513060 FCGR2AP12318 317 aa12.15□□□□□ -0.46
RACK1-230ENST00000513060 HIST1H1CP16403 213 aaKnown RBP12.15□□□□□ -0.46
RACK1-230ENST00000513060 ACVR2AP27037 513 aa12.15□□□□□ -0.46
RACK1-230ENST00000513060 GRK5P34947 590 aa12.15□□□□□ -0.46
RACK1-230ENST00000513060 PTGER4P35408 488 aa12.15□□□□□ -0.46
RACK1-230ENST00000513060 ACVR1BP36896 505 aa12.15□□□□□ -0.46
RACK1-230ENST00000513060 DAP3P51398 398 aaKnown RBP12.15□□□□□ -0.46
RACK1-230ENST00000513060 SLC16A1P53985 500 aa12.15□□□□□ -0.46
RACK1-230ENST00000513060 MELKQ14680 651 aa12.15□□□□□ -0.46
RACK1-230ENST00000513060 RNPS1Q15287 305 aaKnown RBP12.15□□□□□ -0.46
RACK1-230ENST00000513060 ZNF362Q5T0B9 420 aaPredicted RBP12.15□□□□□ -0.46
RACK1-230ENST00000513060 ZNF691Q5VV52 312 aa12.15□□□□□ -0.46
RACK1-230ENST00000513060 NSUN5P2Q63ZY6 315 aa12.15□□□□□ -0.46
RACK1-230ENST00000513060 GPR139Q6DWJ6 353 aa12.15□□□□□ -0.46
RACK1-230ENST00000513060 USP51Q70EK9 711 aa12.15□□□□□ -0.46
RACK1-230ENST00000513060 DOLPP1Q86YN1 238 aa12.15□□□□□ -0.46
RACK1-230ENST00000513060 MCEMP1Q8IX19 187 aa12.15□□□□□ -0.46
RACK1-230ENST00000513060 ARIH2OSQ8N7S6 290 aa12.15□□□□□ -0.46
RACK1-230ENST00000513060 ZIC4Q8N9L1 334 aa12.15□□□□□ -0.46
RACK1-230ENST00000513060 ST6GALNAC3Q8NDV1 305 aa12.15□□□□□ -0.46
RACK1-230ENST00000513060 OR4K13Q8NH42 304 aa12.15□□□□□ -0.46
RACK1-230ENST00000513060 BBC3Q96PG8 261 aaPredicted RBP12.15□□□□□ -0.46
RACK1-230ENST00000513060 ZNF385AQ96PM9 386 aaKnown RBP12.15□□□□□ -0.46
RACK1-230ENST00000513060 SLC38A2Q96QD8 506 aa12.15□□□□□ -0.46
RACK1-230ENST00000513060 APOL4Q9BPW4 351 aa12.15□□□□□ -0.46
RACK1-230ENST00000513060 EMC6Q9BV81 110 aa12.15□□□□□ -0.46
RACK1-230ENST00000513060 IMPAD1Q9NX62 359 aa12.15□□□□□ -0.46
RACK1-230ENST00000513060 FLVCR1Q9Y5Y0 555 aa12.15□□□□□ -0.46
RACK1-230ENST00000513060 POLEQ07864 2286 aa12.15□□□□□ -0.47
RACK1-230ENST00000513060 CFAP46Q8IYW2 2715 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 IGKV3D-15A0A087WSY6 115 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 NPIPB13A6NJU9 1138 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 NPIPB4C9JG80 1138 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 IMPA2O14732 288 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 TXNDC12O95881 172 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 IGHMP01871 453 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 PCYT1AP49585 367 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 BIDP55957 195 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 CLDN17P56750 224 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 IL18R1Q13478 541 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 PDK3Q15120 406 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 ARMC4Q5T2S8 1044 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 RTL6Q6ICC9 239 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 C3P1Q6ZMU1 363 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 PTCHD4Q6ZW05 846 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 TUSC5Q8IXB3 177 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 OR52E2Q8NGJ4 325 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 WNT2BQ93097 391 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 PLEKHA8Q96JA3 519 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 IL4I1Q96RQ9 567 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 ANKRD60Q9BZ19 345 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 PRRG3Q9BZD7 231 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 Q9H521 79 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 RNF122Q9H9V4 155 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 CMC2Q9NRP2 79 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 CLEC4AQ9UMR7 237 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 FAM215AQ9Y5M1 114 aa12.14□□□□□ -0.47
RACK1-230ENST00000513060 SLC35F4A4IF30 521 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 CD8B2A6NJW9 211 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 ZNF726A6NNF4 738 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 RIIAD1A6NNX1 92 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 XKRYO14609 159 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 GPR171O14626 319 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 ARHGEF9O43307 516 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 TLX2O43763 284 aaPredicted RBP12.13□□□□□ -0.47
RACK1-230ENST00000513060 PRKYO43930 277 aa12.13□□□□□ -0.47
RACK1-230ENST00000513060 IFNGP01579 166 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms