RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 A0A1W2PNN7 141 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 LRP5LA4QPB2 252 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 NPIPA7E9PJI5 369 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 H3BNH8 94 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 XPO1O14980 1071 aaKnown RBP0.79□□□□□ -2.28
PDGFC-208ENST00000512711 TM7SF2O76062 418 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 NPIPA8P0DM63 369 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 LGALS3P17931 250 aaKnown RBP0.79□□□□□ -2.28
PDGFC-208ENST00000512711 MMP11P24347 488 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 PSMA2P25787 234 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 TDO2P48775 406 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 RPS21P63220 83 aaKnown RBP0.79□□□□□ -2.28
PDGFC-208ENST00000512711 PITPNAQ00169 270 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 ZNF616Q08AN1 781 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 PJVKQ0ZLH3 352 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 AQP6Q13520 282 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 VGLL4Q14135 290 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 ZBED5Q49AG3 693 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 COA6Q5JTJ3 125 aaKnown RBP0.79□□□□□ -2.28
PDGFC-208ENST00000512711 HES5Q5TA89 166 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 GALNT17Q6IS24 598 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 DNAJC24Q6P3W2 148 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 LRRC8BQ6P9F7 803 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 AFTPHQ6ULP2 937 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 KDM7AQ6ZMT4 941 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 LINC00336Q6ZUF6 198 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 PIANPQ8IYJ0 282 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 CLEC4FQ8N1N0 589 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 DHRSXQ8N5I4 330 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 ZNF713Q8N859 430 aaPredicted RBP0.79□□□□□ -2.28
PDGFC-208ENST00000512711 OR10G4Q8NGN3 311 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 FAM3CQ92520 227 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 L3HYPDHQ96EM0 354 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 ECSITQ9BQ95 431 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 GABARAPL3Q9BY60 117 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 REEP4Q9H6H4 257 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 YY1AP1Q9H869 796 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 NINJ2Q9NZG7 142 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 MMP17Q9ULZ9 603 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 NPIPA1Q9UND3 350 aa0.79□□□□□ -2.28
PDGFC-208ENST00000512711 RPL36Q9Y3U8 105 aaKnown RBP0.79□□□□□ -2.28
PDGFC-208ENST00000512711 IGKV2-24A0A0C4DH68 120 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 TMEM223A0PJW6 202 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 FAM170AA1A519 330 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 KMOO15229 486 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 RAD51BO15315 384 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 ZSCAN12O43309 604 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 SMIM10L1P0DMW3 83 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 IGHV1-8P0DP01 117 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 FOLR1P15328 257 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 CMA1P23946 247 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 CYP2F1P24903 491 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 GCAP28676 217 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 TGFBR1P36897 503 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 IRX3P78415 501 aaPredicted RBP0.78□□□□□ -2.28
PDGFC-208ENST00000512711 OXA1LQ15070 435 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 IRF4Q15306 451 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 POU2AF1Q16633 256 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 PHYHD1Q5SRE7 291 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 PLBD1Q6P4A8 553 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 CNIH2Q6PI25 160 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 DUX4L9Q6RFH8 374 aaPredicted RBP0.78□□□□□ -2.28
PDGFC-208ENST00000512711 HSDL2Q6YN16 418 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 PGAP1Q75T13 922 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 STRADAQ7RTN6 431 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 BHLHA15Q7RTS1 189 aaPredicted RBP0.78□□□□□ -2.28
PDGFC-208ENST00000512711 GATSQ8NAP1 163 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 MSANTD4Q8NCY6 345 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 STXBP6Q8NFX7 210 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 VN1R2Q8NFZ6 395 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 GEMIN6Q8WXD5 167 aaKnown RBP0.78□□□□□ -2.28
PDGFC-208ENST00000512711 TVP23CQ96ET8 276 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 PELI1Q96FA3 418 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 SMIM10Q96HG1 83 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 C4orf36Q96KX1 117 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 AMDHD1Q96NU7 426 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 TSSK3Q96PN8 268 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 TMEM237Q96Q45 408 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 SECISBP2Q96T21 854 aaKnown RBP0.78□□□□□ -2.28
PDGFC-208ENST00000512711 RNF2Q99496 336 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 RIT2Q99578 217 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 DOK1Q99704 481 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 FICDQ9BVA6 458 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 DPH5Q9H2P9 285 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 LY9Q9HBG7 655 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 PSG8Q9UQ74 426 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 CHMP2BQ9UQN3 213 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 SIGLEC9Q9Y336 463 aa0.78□□□□□ -2.28
PDGFC-208ENST00000512711 HELZ2Q9BYK8 2649 aaKnown RBP0.78□□□□□ -2.29
PDGFC-208ENST00000512711 TICRRQ7Z2Z1 1910 aa0.77□□□□□ -2.29
PDGFC-208ENST00000512711 ARPC4-TTLL3A0A0A6YYG9 625 aa0.77□□□□□ -2.29
PDGFC-208ENST00000512711 A0A1B0GVI7 797 aa0.77□□□□□ -2.29
PDGFC-208ENST00000512711 A0A1W2PNV4 684 aa0.77□□□□□ -2.29
PDGFC-208ENST00000512711 TCRBV9S1A1TA0A576 114 aa0.77□□□□□ -2.29
PDGFC-208ENST00000512711 TAPBPO15533 448 aa0.77□□□□□ -2.29
PDGFC-208ENST00000512711 OXSR1O95747 527 aaPredicted RBP0.77□□□□□ -2.29
PDGFC-208ENST00000512711 CCNE2O96020 404 aa0.77□□□□□ -2.29
PDGFC-208ENST00000512711 BCHEP06276 602 aa0.77□□□□□ -2.29
PDGFC-208ENST00000512711 UBTFL1P0CB47 393 aaPredicted RBP0.77□□□□□ -2.29
PDGFC-208ENST00000512711 GYG1P46976 350 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms