RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 NXF5Q9H1B4 397 aaKnown RBP5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 PIGUQ9H490 435 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 EGLN3Q9H6Z9 239 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 ACP6Q9NPH0 428 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 GSN-AS1Q9NRJ2 163 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 LOXL2Q9Y4K0 774 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 CLIC1O00299 241 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 SIGLEC5O15389 551 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 SYF2O95926 243 aaKnown RBP5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 UMODP07911 640 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 NBEAP1P0C6P0 100 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 MAGEA3P43357 314 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 GLUD2P49448 558 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 DAP3P51398 398 aaKnown RBP5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 RAB10P61026 200 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 SEMG2Q02383 582 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 DPYSL3Q14195 570 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 C9orf135Q5VTT2 229 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 OR4C11Q6IEV9 310 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 FAHD1Q6P587 224 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 DHFR2Q86XF0 187 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 DTWD1Q8N5C7 304 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 TMEM251Q8N6I4 163 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 CATSPER1Q8NEC5 780 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 UPRTQ96BW1 309 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 ZNF512Q96ME7 567 aaPredicted RBP5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 TMEM121Q9BTD3 319 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 CDCA4Q9BXL8 241 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 UGT1A7Q9HAW7 530 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 MLXIPLQ9NP71 852 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 SLC25A37Q9NYZ2 338 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 KLHL13Q9P2N7 655 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 ZDHHC9Q9Y397 364 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 TESMINQ9Y4I5 508 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 IRAK3Q9Y616 596 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 MYH13Q9UKX3 1938 aa5.56□□□□□ -1.52
TRAPPC11-209ENST00000512476 OR2M5A3KFT3 312 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 GNB5O14775 395 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 SH2D1BO14796 132 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 SLC31A2O15432 143 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 RGS16O15492 202 aaPredicted RBP5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 ZNF749O43361 778 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 FRAT2O75474 233 aaPredicted RBP5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 NDUFA10O95299 355 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 PLEKHA8P1O95397 391 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 CDH1P12830 882 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 IVDP26440 423 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 TMED10P49755 219 aaKnown RBP5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 MAGOHP61326 146 aaKnown RBP5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 BTG1P62324 171 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 MRPS6P82932 125 aaKnown RBP5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 FPGSQ05932 587 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 MESDQ14696 234 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 OR4D1Q15615 310 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 SLC25A52Q3SY17 297 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 ACTL10Q5JWF8 245 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 PPM1LQ5SGD2 360 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 DMKNQ6E0U4 476 aaPredicted RBP5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 ZNF367Q7RTV3 350 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 NLRX1Q86UT6 975 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 ZNF547Q8IVP9 402 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 LRRC57Q8N9N7 239 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 MDGA1Q8NFP4 955 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 GPR148Q8TDV2 347 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 NSL1Q96IY1 281 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 OLFM3Q96PB7 478 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 ZYG11BQ9C0D3 744 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 TMEM39BQ9GZU3 492 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 PPA2Q9H2U2 334 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 TMEM38AQ9H6F2 299 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 MARCH7Q9H992 704 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 FGF20Q9NP95 211 aaPredicted RBP5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 SMPXQ9UHP9 88 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 USH1CQ9Y6N9 552 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 CACNA1SQ13698 1873 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 A0A1B0GTW7 788 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 ZNF732B4DXR9 585 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 PSMD12O00232 456 aaPredicted RBP5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 ZNF195O14628 629 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 XPNPEP2O43895 674 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 CLDN9O95484 217 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 PEX11BO96011 259 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 LCKP06239 509 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 SP1P08047 785 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 HCKP08631 526 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 IRF2P14316 349 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 DPEP1P16444 411 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 SGSHP51688 502 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 MAZP56270 477 aaKnown RBP5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 CCL7P80098 99 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 MLLT11Q13015 90 aaPredicted RBP5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 PDIA2Q13087 525 aaKnown RBP5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 DYNC1I2Q13409 638 aaKnown RBP5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 LTB4RQ15722 352 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 SLC36A2Q495M3 483 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 SLC22A6Q4U2R8 563 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 ACSM3Q53FZ2 586 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 FOXR1Q6PIV2 292 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 CERS6Q6ZMG9 384 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 STOX1Q6ZVD7 989 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms