RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 VPS25Q9BRG1 176 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 VCX2Q9H322 139 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 C2orf78A6NCI8 922 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 GLOD5A6NK44 160 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 H2AFB1P0C5Y9 115 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 OR4Q2P0C623 313 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 MBTPS1Q14703 1052 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 CST9LP1Q5W188 147 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 SLC38A6Q8IZM9 456 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 SYS1Q8N2H4 156 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 NANOGP1Q8N7R0 232 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 OR9K2Q8NGE7 335 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 POU2F3Q9UKI9 436 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 TUBGCP6Q96RT7 1819 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 ZNF840PA6NDX5 716 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 GRB2P62993 217 aaKnown RBP7.78□□□□□ -1.16
HTT-208ENST00000510626 STRADBQ9C0K7 418 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 POMT2Q9UKY4 750 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 PCDHGA1Q9Y5H4 931 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 PTGDR2Q9Y5Y4 395 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 TRBV4-1A0A0J9YWV2 114 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 LGALS8O00214 317 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 ALDOCP09972 364 aaKnown RBP7.78□□□□□ -1.16
HTT-208ENST00000510626 C8orf89P0DMQ9 161 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 DAPP51397 102 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 PIN1Q13526 163 aaPredicted RBP7.78□□□□□ -1.16
HTT-208ENST00000510626 FAM213BQ8TBF2 198 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 TMEM190Q8WZ59 177 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 UBQLN4Q9NRR5 601 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 C5P01031 1676 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 TM4SF1P30408 202 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 CCKARP32238 428 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 CD96P40200 585 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 OR4N5Q8IXE1 308 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 LILRA2Q8N149 483 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 FRMD1Q8N878 549 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 MARCH4Q9P2E8 410 aaPredicted RBP7.78□□□□□ -1.16
HTT-208ENST00000510626 MEOX2P50222 304 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 PABPC1L2AQ5JQF8 200 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 MKXQ8IYA7 352 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 SRPK3Q9UPE1 567 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 SNED1Q8TER0 1413 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 SSC5DA1L4H1 1573 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 BCL2L11O43521 198 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 EBPQ15125 230 aaKnown RBP7.78□□□□□ -1.16
HTT-208ENST00000510626 RPS27LQ71UM5 84 aaKnown RBP7.78□□□□□ -1.16
HTT-208ENST00000510626 ZNF765Q7L2R6 523 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 FAM58AQ8N1B3 248 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 GMPPAQ96IJ6 420 aaPredicted RBP7.78□□□□□ -1.16
HTT-208ENST00000510626 F2RL3Q96RI0 385 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 RGPD8O14715 1765 aaPredicted RBP7.78□□□□□ -1.16
HTT-208ENST00000510626 KIR2DS1A0A191URI9 304 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 OPN1MWP04001 364 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 OPN1MW2P0DN77 364 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 OPN1MW3P0DN78 364 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 KIR2DS4P43632 304 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 EMP2P54851 167 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 ACY1Q03154 408 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 KIR2DS1Q14954 304 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 LSMEM2Q8N112 164 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 L3MBTL4Q8NA19 623 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 OR51F2Q8NH61 342 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 PSMF1Q92530 271 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 KIRREL1Q96J84 757 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 MAP3K3Q99759 626 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 K7ERU9 68 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 TBX18O95935 607 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 NDUFA6P56556 154 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 TPPP2P59282 170 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 MRPS34P82930 218 aaKnown RBP7.78□□□□□ -1.16
HTT-208ENST00000510626 LKAAEAR1Q8TD35 194 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 IRF7Q92985 503 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 ZMYND19Q96E35 227 aaPredicted RBP7.78□□□□□ -1.16
HTT-208ENST00000510626 ELOVL3Q9HB03 270 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 CXXC1Q9P0U4 656 aaPredicted RBP7.78□□□□□ -1.16
HTT-208ENST00000510626 SLC9B1P1A6NJY1 282 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 DRGXA6NNA5 263 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 COCHO43405 550 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 PNPP00491 289 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 THBS1P07996 1170 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 DOC2BQ14184 412 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 BTNL8Q6UX41 500 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 LMNTD1Q8N9Z9 388 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 YIPF6Q96EC8 236 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 GCM1Q9NP62 436 aa7.78□□□□□ -1.16
HTT-208ENST00000510626 ZNF629Q9UEG4 869 aaPredicted RBP7.78□□□□□ -1.16
HTT-208ENST00000510626 FAM74A1Q5RGS3 127 aa7.77□□□□□ -1.16
HTT-208ENST00000510626 DPPA4Q7L190 304 aa7.77□□□□□ -1.16
HTT-208ENST00000510626 NPWQ8N729 165 aa7.77□□□□□ -1.16
HTT-208ENST00000510626 OR5AP2Q8NGF4 316 aa7.77□□□□□ -1.16
HTT-208ENST00000510626 CREB3L4Q8TEY5 395 aa7.77□□□□□ -1.16
HTT-208ENST00000510626 CDH20Q9HBT6 801 aa7.77□□□□□ -1.16
HTT-208ENST00000510626 HRASLS2Q9NWW9 162 aa7.77□□□□□ -1.16
HTT-208ENST00000510626 LNP1A1A4G5 178 aa7.77□□□□□ -1.16
HTT-208ENST00000510626 SELENOFO60613 162 aa7.77□□□□□ -1.16
HTT-208ENST00000510626 RABIFP47224 123 aa7.77□□□□□ -1.16
HTT-208ENST00000510626 PRRT3Q5FWE3 981 aa7.77□□□□□ -1.16
HTT-208ENST00000510626 GRINAQ7Z429 371 aa7.77□□□□□ -1.16
HTT-208ENST00000510626 SMIM4Q8WVI0 70 aa7.77□□□□□ -1.16
HTT-208ENST00000510626 SLC41A2Q96JW4 573 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms