RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 KLHL14Q9P2G3 628 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 FZR1Q9UM11 496 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 ARHGAP32A7KAX9 2087 aa13.68□□□□□ -0.22
RAB40C-202ENST00000509637 A0A096LPI6 279 aa13.67□□□□□ -0.22
RAB40C-202ENST00000509637 ZNF99A8MXY4 864 aaPredicted RBP13.67□□□□□ -0.22
RAB40C-202ENST00000509637 TCF21O43680 179 aa13.67□□□□□ -0.22
RAB40C-202ENST00000509637 ZNF500O60304 480 aaPredicted RBP13.67□□□□□ -0.22
RAB40C-202ENST00000509637 IL6P05231 212 aa13.67□□□□□ -0.22
RAB40C-202ENST00000509637 HNF1AP20823 631 aa13.67□□□□□ -0.22
RAB40C-202ENST00000509637 CFPP27918 469 aa13.67□□□□□ -0.22
RAB40C-202ENST00000509637 ARR3P36575 388 aa13.67□□□□□ -0.22
RAB40C-202ENST00000509637 ALDH3B1P43353 468 aa13.67□□□□□ -0.22
RAB40C-202ENST00000509637 DVL1P1P54792 670 aaPredicted RBP13.67□□□□□ -0.22
RAB40C-202ENST00000509637 FXNQ16595 210 aa13.67□□□□□ -0.22
RAB40C-202ENST00000509637 WDR88Q6ZMY6 472 aa13.67□□□□□ -0.22
RAB40C-202ENST00000509637 H1FNTQ75WM6 255 aaPredicted RBP13.67□□□□□ -0.22
RAB40C-202ENST00000509637 ZNF584Q8IVC4 421 aa13.67□□□□□ -0.22
RAB40C-202ENST00000509637 GPR137CQ8N3F9 429 aa13.67□□□□□ -0.22
RAB40C-202ENST00000509637 ANKRD42Q8N9B4 389 aa13.67□□□□□ -0.22
RAB40C-202ENST00000509637 GLB1L3Q8NCI6 653 aaPredicted RBP13.67□□□□□ -0.22
RAB40C-202ENST00000509637 PAIP2Q9BPZ3 127 aaKnown RBP13.67□□□□□ -0.22
RAB40C-202ENST00000509637 SYT3Q9BQG1 590 aa13.67□□□□□ -0.22
RAB40C-202ENST00000509637 IKZF5Q9H5V7 419 aa13.67□□□□□ -0.22
RAB40C-202ENST00000509637 NARFLQ9H6Q4 476 aa13.67□□□□□ -0.22
RAB40C-202ENST00000509637 A4GALTQ9NPC4 353 aa13.67□□□□□ -0.22
RAB40C-202ENST00000509637 SLC52A3Q9NQ40 469 aa13.67□□□□□ -0.22
RAB40C-202ENST00000509637 CALML5Q9NZT1 146 aa13.67□□□□□ -0.22
RAB40C-202ENST00000509637 PRDM4Q9UKN5 801 aa13.67□□□□□ -0.22
RAB40C-202ENST00000509637 PAX7P23759 505 aa13.66□□□□□ -0.22
RAB40C-202ENST00000509637 LMO4P61968 165 aa13.66□□□□□ -0.22
RAB40C-202ENST00000509637 IL1RL1Q01638 556 aa13.66□□□□□ -0.22
RAB40C-202ENST00000509637 MFSD13AQ14CX5 517 aa13.66□□□□□ -0.22
RAB40C-202ENST00000509637 FAM69AQ5T7M9 428 aa13.66□□□□□ -0.22
RAB40C-202ENST00000509637 ZNF627Q7L945 461 aa13.66□□□□□ -0.22
RAB40C-202ENST00000509637 FUNDC1Q8IVP5 155 aa13.66□□□□□ -0.22
RAB40C-202ENST00000509637 LSMEM1Q8N8F7 131 aa13.66□□□□□ -0.22
RAB40C-202ENST00000509637 ANKRD27Q96NW4 1050 aa13.66□□□□□ -0.22
RAB40C-202ENST00000509637 PARD6BQ9BYG5 372 aa13.66□□□□□ -0.22
RAB40C-202ENST00000509637 LPAR2Q9HBW0 351 aa13.66□□□□□ -0.22
RAB40C-202ENST00000509637 DYNLRB1Q9NP97 96 aa13.66□□□□□ -0.22
RAB40C-202ENST00000509637 TREM2Q9NZC2 230 aa13.66□□□□□ -0.22
RAB40C-202ENST00000509637 REV1Q9UBZ9 1251 aa13.66□□□□□ -0.22
RAB40C-202ENST00000509637 ZNF232Q9UNY5 417 aa13.66□□□□□ -0.22
RAB40C-202ENST00000509637 IFT52Q9Y366 437 aa13.66□□□□□ -0.22
RAB40C-202ENST00000509637 A0A087WUJ7 227 aa13.65□□□□□ -0.22
RAB40C-202ENST00000509637 CLIC1O00299 241 aa13.65□□□□□ -0.22
RAB40C-202ENST00000509637 AIM2O14862 343 aa13.65□□□□□ -0.22
RAB40C-202ENST00000509637 RP2O75695 350 aa13.65□□□□□ -0.22
RAB40C-202ENST00000509637 RGS9O75916 674 aaPredicted RBP13.65□□□□□ -0.22
RAB40C-202ENST00000509637 SNUPNO95149 360 aaKnown RBP13.65□□□□□ -0.22
RAB40C-202ENST00000509637 SRP14P37108 136 aaKnown RBP13.65□□□□□ -0.22
RAB40C-202ENST00000509637 POLR2JP52435 117 aaKnown RBP13.65□□□□□ -0.22
RAB40C-202ENST00000509637 POU3F1Q03052 451 aaPredicted RBP13.65□□□□□ -0.22
RAB40C-202ENST00000509637 RUNX1T1Q06455 604 aa13.65□□□□□ -0.22
RAB40C-202ENST00000509637 LRRC74AQ0VAA2 488 aa13.65□□□□□ -0.22
RAB40C-202ENST00000509637 HNRNPA0Q13151 305 aaKnown RBP13.65□□□□□ -0.22
RAB40C-202ENST00000509637 CAMK2DQ13557 499 aa13.65□□□□□ -0.22
RAB40C-202ENST00000509637 C1DQ13901 141 aaKnown RBP13.65□□□□□ -0.22
RAB40C-202ENST00000509637 CEP85LQ5SZL2 805 aa13.65□□□□□ -0.22
RAB40C-202ENST00000509637 NXNQ6DKJ4 435 aa13.65□□□□□ -0.22
RAB40C-202ENST00000509637 TSPYL5Q86VY4 417 aaPredicted RBP13.65□□□□□ -0.22
RAB40C-202ENST00000509637 PAQR4Q8N4S7 273 aaPredicted RBP13.65□□□□□ -0.22
RAB40C-202ENST00000509637 NFKBIDQ8NI38 313 aa13.65□□□□□ -0.22
RAB40C-202ENST00000509637 SLC38A4Q969I6 547 aa13.65□□□□□ -0.22
RAB40C-202ENST00000509637 ITCHQ96J02 903 aa13.65□□□□□ -0.22
RAB40C-202ENST00000509637 TSPAN32Q96QS1 320 aa13.65□□□□□ -0.22
RAB40C-202ENST00000509637 ZBTB18Q99592 522 aa13.65□□□□□ -0.22
RAB40C-202ENST00000509637 METTL17Q9H7H0 456 aaPredicted RBP13.65□□□□□ -0.22
RAB40C-202ENST00000509637 THAP1Q9NVV9 213 aa13.65□□□□□ -0.22
RAB40C-202ENST00000509637 ZIM2Q9NZV7 527 aa13.65□□□□□ -0.22
RAB40C-202ENST00000509637 USP22Q9UPT9 525 aa13.65□□□□□ -0.22
RAB40C-202ENST00000509637 CMAHPQ9Y471 501 aa13.65□□□□□ -0.22
RAB40C-202ENST00000509637 TRAV36DV7A0A075B6V5 113 aa13.64□□□□□ -0.23
RAB40C-202ENST00000509637 SYNGR3O43761 229 aa13.64□□□□□ -0.23
RAB40C-202ENST00000509637 LYPD3O95274 346 aa13.64□□□□□ -0.23
RAB40C-202ENST00000509637 ANP32DO95626 131 aa13.64□□□□□ -0.23
RAB40C-202ENST00000509637 CLPTM1O96005 669 aa13.64□□□□□ -0.23
RAB40C-202ENST00000509637 THY1P04216 161 aa13.64□□□□□ -0.23
RAB40C-202ENST00000509637 ARAFP10398 606 aa13.64□□□□□ -0.23
RAB40C-202ENST00000509637 CD79AP11912 226 aa13.64□□□□□ -0.23
RAB40C-202ENST00000509637 IDO1P14902 403 aa13.64□□□□□ -0.23
RAB40C-202ENST00000509637 B4GALT1P15291 398 aa13.64□□□□□ -0.23
RAB40C-202ENST00000509637 EGR1P18146 543 aa13.64□□□□□ -0.23
RAB40C-202ENST00000509637 CAPZA2P47755 286 aa13.64□□□□□ -0.23
RAB40C-202ENST00000509637 GIPRP48546 466 aa13.64□□□□□ -0.23
RAB40C-202ENST00000509637 RAB39AQ14964 217 aa13.64□□□□□ -0.23
RAB40C-202ENST00000509637 PAGE3Q5JUK9 113 aa13.64□□□□□ -0.23
RAB40C-202ENST00000509637 ZNF813Q6ZN06 617 aa13.64□□□□□ -0.23
RAB40C-202ENST00000509637 SKA3Q8IX90 412 aa13.64□□□□□ -0.23
RAB40C-202ENST00000509637 PIK3C3Q8NEB9 887 aa13.64□□□□□ -0.23
RAB40C-202ENST00000509637 MGARPQ8TDB4 240 aa13.64□□□□□ -0.23
RAB40C-202ENST00000509637 GTF3AQ92664 365 aaKnown RBP13.64□□□□□ -0.23
RAB40C-202ENST00000509637 SLC35B4Q969S0 331 aa13.64□□□□□ -0.23
RAB40C-202ENST00000509637 CENPHQ9H3R5 247 aa13.64□□□□□ -0.23
RAB40C-202ENST00000509637 C12orf10Q9HB07 376 aa13.64□□□□□ -0.23
RAB40C-202ENST00000509637 ZNF275Q9NSD4 429 aaPredicted RBP13.64□□□□□ -0.23
RAB40C-202ENST00000509637 TRBV5-3A0A0A0MS03 114 aa13.63□□□□□ -0.23
RAB40C-202ENST00000509637 TMEM120BA0PK00 339 aa13.63□□□□□ -0.23
RAB40C-202ENST00000509637 NAT2P11245 290 aa13.63□□□□□ -0.23
RAB40C-202ENST00000509637 ETS2P15036 469 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms