RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 ACACBO00763 2458 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 FREM3P0C091 2139 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 ASPMQ8IZT6 3477 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 SURF4O15260 269 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 MRPS14O60783 128 aaKnown RBP12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 TP53P04637 393 aaPredicted RBP12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 CCDC159P0C7I6 412 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 IL11P20809 199 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 SLC25A1P53007 311 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 POU3F1Q03052 451 aaPredicted RBP12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 SRYQ05066 204 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 LTBQ06643 244 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 RASGEF1BQ0VAM2 473 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 KRR1Q13601 381 aaKnown RBP12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 SLC17A1Q14916 467 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 SLC35D3Q5M8T2 416 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 THEM4Q5T1C6 240 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 C1QL3Q5VWW1 255 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 NXNL2Q5VZ03 156 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 CHERPQ8IWX8 916 aaKnown RBP12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 TMEM99Q8N816 258 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 OR9K2Q8NGE7 335 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 RHOXF1Q8NHV9 184 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 IPCEF1Q8WWN9 437 aaPredicted RBP12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 HDAC2Q92769 488 aaKnown RBP12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 ZNF566Q969W8 418 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 TMEM45BQ96B21 275 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 GMPPAQ96IJ6 420 aaPredicted RBP12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 LRR1Q96L50 414 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 CNBD2Q96M20 576 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 MUS81Q96NY9 551 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 ASB6Q9NWX5 421 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 EMC9Q9Y3B6 208 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 IER3IP1Q9Y5U9 82 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 CACNA1GO43497 2377 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 FRYQ5TBA9 3013 aa12.89□□□□□ -0.35
HMGCLL1-208ENST00000508459 A0A1B0GTH9 108 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 C11orf98E9PRG8 122 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 MS4A18H0YCH9 400 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 K7EM74 188 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 SLC43A1O75387 559 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 CNOT4O95628 575 aaKnown RBP12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 PPP1R3DO95685 299 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 PTNP21246 168 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 FUT4P22083 530 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 STARP49675 285 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 LSM11P83369 360 aaKnown RBP eCLIP12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 FHL1Q13642 323 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 MAD2L1BPQ15013 274 aaPredicted RBP12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 PON3Q15166 354 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 ACKR1Q16570 336 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 MS4A18Q3C1V0 323 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 KLHL22Q53GT1 634 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 TMEM201Q5SNT2 666 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 C1QTNF12Q5T7M4 302 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 GFRALQ6UXV0 394 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 FAM122BQ7Z309 247 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 CISD2Q8N5K1 135 aaKnown RBP12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 Q8NA96 180 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 LRRC75AQ8NAA5 344 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 FAM57AQ8TBR7 257 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 NPAS1Q99742 590 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 BCO1Q9HAY6 547 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 SPRR3Q9UBC9 169 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 WARS2Q9UGM6 360 aaKnown RBP12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 MYRFQ9Y2G1 1151 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 CFAP47Q6ZTR5 3102 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 NCKAP5O14513 1909 aa12.88□□□□□ -0.35
HMGCLL1-208ENST00000508459 EFCAB10A6NFE3 127 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 LRRN3E7EW58 273 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 SMAD9O15198 467 aaKnown RBP12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 ATXN7O15265 892 aaPredicted RBP12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 TLX2O43763 284 aaPredicted RBP12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 F13BP05160 661 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 YES1P07947 543 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 ACVR1BP36896 505 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 CAPZA2P47755 286 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 SUCLG1P53597 346 aaKnown RBP12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 CLRN1P58418 232 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 ISL1P61371 349 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 FOXK1P85037 733 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 RIPPLY2Q5TAB7 128 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 NSUN5P2Q63ZY6 315 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 TMEM211Q6ICI0 200 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 THSD4Q6ZMP0 1018 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 CREB3L2Q70SY1 520 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 ADGRE4PQ86SQ3 457 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 EGFL6Q8IUX8 553 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 POMGNT2Q8NAT1 580 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 ST6GALNAC3Q8NDV1 305 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 OR8D4Q8NGM9 314 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 MOSPD2Q8NHP6 518 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 FBLIM1Q8WUP2 373 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 SNRNP40Q96DI7 357 aaKnown RBP12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 IL4I1Q96RQ9 567 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 MNTQ99583 582 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 PLA2G12AQ9BZM1 189 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 VCX3AQ9NNX9 186 aa12.87□□□□□ -0.35
HMGCLL1-208ENST00000508459 PLCXD1Q9NUJ7 323 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms