RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 OR2W3Q7Z3T1 314 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 RALGPS2Q86X27 583 aaPredicted RBP6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 FAM109AQ8N4B1 249 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 CPSF7Q8N684 471 aaKnown RBP6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 LRRC52Q8N7C0 313 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 THAP8Q8NA92 274 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 ADAD2Q8NCV1 583 aaKnown RBP6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 ATP6V1C2Q8NEY4 427 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 OR10X1Q8NGY0 326 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 ZNF417Q8TAU3 575 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 ZNF398Q8TD17 642 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 ZBTB8AQ96BR9 441 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 RNF183Q96D59 192 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 ZNF587Q96SQ5 575 aaPredicted RBP6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 C2orf88Q9BSF0 95 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 TMED9Q9BVK6 235 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 DDX31Q9H8H2 851 aaKnown RBP6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 NUDT5Q9UKK9 219 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 MTCH2Q9Y6C9 303 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 CAMTA1Q9Y6Y1 1673 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 STRCP1A6NGW2 1772 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 ANTXRLA6NF34 631 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 TVP23AA6NH52 213 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 F5H768 121 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 LAMTOR5O43504 91 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 C1RP00736 705 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 IGF1P05019 195 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 GTF2F2P13984 249 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 GNRHRP30968 328 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 SRP9P49458 86 aaKnown RBP6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 MEOX2P50222 304 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 CAV2P51636 162 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 DLX5P56178 289 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 SYTL3Q4VX76 610 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 RFTN2Q52LD8 501 aaPredicted RBP6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 WDR25Q64LD2 544 aaPredicted RBP6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 ANKRD34AQ69YU3 496 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 ANKRD54Q6NXT1 300 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 DHRS4L2Q6PKH6 230 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 Q7L0L9 218 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 MOB3BQ86TA1 216 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 MREGQ8N565 214 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 NANOGP1Q8N7R0 232 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 OR2AK2Q8NG84 335 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 MAGEE2Q8TD90 523 aaPredicted RBP6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 FLYWCH2Q96CP2 140 aaKnown RBP6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 TLCD1Q96CP7 247 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 CXorf40BQ96DE9 158 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 SDHCQ99643 169 aaPredicted RBP6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 ABHD14AQ9BUJ0 271 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 NUDT9Q9BW91 350 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 MFSD1Q9H3U5 465 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 ESRP2Q9H6T0 727 aaKnown RBP6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 PAK1IP1Q9NWT1 392 aaPredicted RBP6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 TREM2Q9NZC2 230 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 MGAT4AQ9UM21 535 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 CTNND2Q9UQB3 1225 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 YARS2Q9Y2Z4 477 aaKnown RBP6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 GOLT1BQ9Y3E0 138 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 HS3ST3A1Q9Y663 406 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 U3KQE9 123 aa6.7□□□□□ -1.34
PDGFRA-206ENST00000508170 DDTLA6NHG4 134 aaPredicted RBP6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 EFCAB7A8K855 629 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 C17orf105B2RV13 164 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 DCTN6O00399 190 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 TXNDC9O14530 226 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 FOXN1O15353 648 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 GRAP2O75791 330 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 MPZL1O95297 269 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 PCCAP05165 728 aaPredicted RBP6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 GSTA1P08263 222 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 ZNF35P13682 527 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 RPL13AP40429 203 aaKnown RBP6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 GABRA4P48169 554 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 VSX2P58304 361 aaPredicted RBP6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 GNG2P59768 71 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 CD81P60033 236 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 RHOAP61586 193 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 ACVR1Q04771 509 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 PNRC1Q12796 327 aaPredicted RBP6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 APOFQ13790 326 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 SF3A2Q15428 464 aaKnown RBP6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 PRUNE1Q86TP1 453 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 NLRX1Q86UT6 975 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 RIMKLAQ8IXN7 391 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 OR6K3Q8NGY3 331 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 OR2AE1Q8NHA4 323 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 R3HDM4Q96D70 268 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 PNKPQ96T60 521 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 AGPAT1Q99943 283 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 SLC19A3Q9BZV2 496 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 GSKIPQ9P0R6 139 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 GHRLQ9UBU3 117 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 RNF6Q9Y252 685 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 RAP2CQ9Y3L5 183 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 SIPA1L3O60292 1781 aaPredicted RBP6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 PXDNQ92626 1479 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 PVALEFA0A1B0GWK0 134 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 FTCDNL1E5RQL4 147 aa6.69□□□□□ -1.34
PDGFRA-206ENST00000508170 LMO7DNF2Z398 122 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms