RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 GIN1Q9NXP7 522 aa1.85□□□□□ -2.11
CDC42SE2-210ENST00000506929 XCL2Q9UBD3 114 aa1.85□□□□□ -2.11
CDC42SE2-210ENST00000506929 YTHDF2Q9Y5A9 579 aaKnown RBP1.85□□□□□ -2.11
CDC42SE2-210ENST00000506929 NUP214P35658 2090 aaPredicted RBP1.85□□□□□ -2.11
CDC42SE2-210ENST00000506929 MROH7-TTC4A0A0A0MT08 1334 aa1.85□□□□□ -2.11
CDC42SE2-210ENST00000506929 NFASCO94856 1347 aa1.85□□□□□ -2.11
CDC42SE2-210ENST00000506929 RPAP1Q9BWH6 1393 aaPredicted RBP1.85□□□□□ -2.11
CDC42SE2-210ENST00000506929 IGLV11-55A0A075B6I3 123 aa1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 PPIAL4EA0A075B759 164 aa1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 CIB4A0PJX0 185 aa1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 MBLAC1A4D2B0 266 aaPredicted RBP1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 TMEM150BA6NC51 233 aa1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 PEX7O00628 323 aa1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 CTDNEP1O95476 244 aa1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 CSF3P09919 207 aa1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 RHOXF2BP0C7M4 288 aa1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 GKN3PP0CG01 181 aa1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 PPIAL4FP0DN26 164 aa1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 IGHV3-43DP0DP04 118 aa1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 PSMA5P28066 241 aa1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 CCR1P32246 355 aa1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 RPL13AP40429 203 aaKnown RBP1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 ABCA11PQ4W5N1 156 aa1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 CCDC92Q53HC0 331 aaPredicted RBP1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 FAM71E1Q6IPT2 247 aa1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 GMCL1P1Q8NEA9 526 aa1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 UBALD1Q8TB05 177 aa1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 SMARCD2Q92925 531 aa1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 EMG1Q92979 244 aaKnown RBP1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 AURKBQ96GD4 344 aaPredicted RBP1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 BMFQ96LC9 184 aa1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 TSNARE1Q96NA8 513 aa1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 FOPNLQ96NB1 174 aa1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 RMND5AQ9H871 391 aa1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 IL26Q9NPH9 171 aa1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 ZNF222Q9UK12 451 aa1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 KIF3AQ9Y496 699 aa1.84□□□□□ -2.11
CDC42SE2-210ENST00000506929 BRWD3Q6RI45 1802 aa1.84□□□□□ -2.12
CDC42SE2-210ENST00000506929 DOCK9Q9BZ29 2069 aa1.84□□□□□ -2.12
CDC42SE2-210ENST00000506929 CEMIPQ8WUJ3 1361 aa1.84□□□□□ -2.12
CDC42SE2-210ENST00000506929 PRSS37A4D1T9 235 aa1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 SLC31A2O15432 143 aa1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 POLR2DO15514 142 aaKnown RBP1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 TOM1O60784 492 aa1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 DUSP3P51452 185 aaPredicted RBP1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 ATP1B3P54709 279 aa1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 ENPEPQ07075 957 aa1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 ASPHQ12797 758 aa1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 SMARCB1Q12824 385 aa1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 GANABQ14697 944 aaKnown RBP1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 SFT2D3Q587I9 215 aa1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 TMEM225Q6GV28 225 aa1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 ZNF615Q8N8J6 731 aa1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 C15orf56Q8N910 161 aa1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 THRSPQ92748 146 aa1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 FRZBQ92765 325 aa1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 NEURL3Q96EH8 262 aa1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 WFIKKN1Q96NZ8 548 aa1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 CLCC1Q96S66 551 aa1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 NPAS2Q99743 824 aa1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 FAIM2Q9BWQ8 316 aa1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 GABARAPL3Q9BY60 117 aa1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 ING2Q9H160 280 aa1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 RIBC2Q9H4K1 309 aa1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 NHEJ1Q9H9Q4 299 aaPredicted RBP1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 WIF1Q9Y5W5 379 aa1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 AP1M2Q9Y6Q5 423 aa1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 MN1Q10571 1320 aaPredicted RBP1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 COL1A2P08123 1366 aa1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 MSH6P52701 1360 aa1.83□□□□□ -2.12
CDC42SE2-210ENST00000506929 WDR62O43379 1518 aa1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 A0A1B0GVI7 797 aa1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 A0A1B0GVX0 72 aa1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 OR5B21A6NL26 309 aa1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 MED7O43513 233 aa1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 IDH1O75874 414 aaKnown RBP1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 GUCA1CO95843 209 aa1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 PRPS2P11908 318 aa1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 POU2F1P14859 743 aa1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 PGAM1P18669 254 aa1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 OPRD1P41143 372 aa1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 NPBWR2P48146 333 aa1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 UBE2AP49459 152 aa1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 HMGCS1Q01581 520 aa1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 TNFRSF17Q02223 184 aa1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 AQP6Q13520 282 aa1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 DPYSL2Q16555 572 aa1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 TPD52L1Q16890 204 aaPredicted RBP1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 ZBED5Q49AG3 693 aa1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 XKR4Q5GH76 650 aa1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 DNAJC24Q6P3W2 148 aa1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 IGFL1Q6UW32 110 aa1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 TRIM69Q86WT6 500 aa1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 CCDC50Q8IVM0 306 aa1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 PGAM4Q8N0Y7 254 aa1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 STPG2Q8N412 459 aa1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 VN1R2Q8NFZ6 395 aa1.82□□□□□ -2.12
CDC42SE2-210ENST00000506929 OR1N2Q8NGR9 330 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms