RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 VNN3Q9NY84 501 aa10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 ELOVL5Q9NYP7 299 aa10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 DNAJB9Q9UBS3 223 aa10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 RCE1Q9Y256 329 aa10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 SAMHD1Q9Y3Z3 626 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 AP4S1Q9Y587 144 aa10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 ANKHD1Q8IWZ3 2542 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-208ENST00000504489 CACNA1DQ01668 2161 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 A1L4Q6 167 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 NPIPB13A6NJU9 1138 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 NPIPB4C9JG80 1138 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 PRSS44E7EML9 344 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 C11orf98E9PRG8 122 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 GNGT2O14610 69 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 CDC42EP2O14613 210 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 CLOCKO15516 846 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 HNRNPRO43390 633 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 RNF13O43567 381 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 OR10H3O60404 316 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 PTP4A3O75365 173 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 DEAF1O75398 565 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 ZNF432O94892 652 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 EDNRAP25101 427 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 CD79BP40259 229 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 AQP2P41181 271 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 GSSP48637 474 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 CLDN17P56750 224 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 POU3F1Q03052 451 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 PPP1R8Q12972 351 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 ZBED5Q49AG3 693 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 FBXW9Q5XUX1 488 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 ZNF770Q6IQ21 691 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 CASP12Q6UXS9 341 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 Q6ZT83 130 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 KIF18BQ86Y91 864 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 ACBD4Q8NC06 268 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 OR13C2Q8NGS9 318 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 MOSPD2Q8NHP6 518 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 TNFRSF13CQ96RJ3 184 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 DENND2DQ9H6A0 471 aaPredicted RBP10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 GALNT8Q9NY28 637 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 PRSS50Q9UI38 385 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 SIGLEC7Q9Y286 467 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 U3KQV3 271 aa10.53□□□□□ -0.72
PDLIM5-208ENST00000504489 ARRDC5A6NEK1 342 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 OR6C65A6NJZ3 312 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 C19orf84I3L1E1 186 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 AKAP8O43823 692 aaKnown RBP10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 TIPRLO75663 272 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 CCNB2O95067 398 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 FCGR1AP12314 374 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 IGFBP2P18065 325 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 FPR3P25089 353 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 DNAJA1P31689 397 aaKnown RBP10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 PEX19P40855 299 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 PRPS1P60891 318 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 SORDQ00796 357 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 TSPAN31Q12999 210 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 MICAQ29983 383 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 ALG10Q5BKT4 473 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 ZFP1Q6P2D0 407 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 PGBD2Q6P3X8 592 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 NIPAL3Q6P499 406 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 GABRG1Q8N1C3 465 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 POMGNT2Q8NAT1 580 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 OR51A7Q8NH64 312 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 GNPDA2Q8TDQ7 276 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 NRBF2Q96F24 287 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 ADAD1Q96M93 576 aaKnown RBP10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 GPA33Q99795 319 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 LINC00470Q9BZP3 86 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 ENKD1Q9H0I2 346 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 SLCO5A1Q9H2Y9 848 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 NTN4Q9HB63 628 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 INIPQ9NRY2 104 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 MALT1Q9UDY8 824 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 PLEKHB1Q9UF11 243 aaPredicted RBP10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 ABCA4P78363 2273 aa10.52□□□□□ -0.73
PDLIM5-208ENST00000504489 TRAV27A0A087WT01 109 aa10.51□□□□□ -0.73
PDLIM5-208ENST00000504489 A0A1W2PRG6 482 aa10.51□□□□□ -0.73
PDLIM5-208ENST00000504489 SLC35F4A4IF30 521 aa10.51□□□□□ -0.73
PDLIM5-208ENST00000504489 UNC119BA6NIH7 251 aa10.51□□□□□ -0.73
PDLIM5-208ENST00000504489 ZNF726A6NNF4 738 aa10.51□□□□□ -0.73
PDLIM5-208ENST00000504489 BCL10O95999 233 aa10.51□□□□□ -0.73
PDLIM5-208ENST00000504489 F12P00748 615 aaPredicted RBP10.51□□□□□ -0.73
PDLIM5-208ENST00000504489 F13BP05160 661 aa10.51□□□□□ -0.73
PDLIM5-208ENST00000504489 POU2F1P14859 743 aa10.51□□□□□ -0.73
PDLIM5-208ENST00000504489 IFNGR1P15260 489 aa10.51□□□□□ -0.73
PDLIM5-208ENST00000504489 PSMB1P20618 241 aaKnown RBP10.51□□□□□ -0.73
PDLIM5-208ENST00000504489 FASP25445 335 aa10.51□□□□□ -0.73
PDLIM5-208ENST00000504489 GRNP28799 593 aaKnown RBP10.51□□□□□ -0.73
PDLIM5-208ENST00000504489 SELENOPP49908 381 aa10.51□□□□□ -0.73
PDLIM5-208ENST00000504489 DAP3P51398 398 aaKnown RBP10.51□□□□□ -0.73
PDLIM5-208ENST00000504489 IST1P53990 364 aa10.51□□□□□ -0.73
PDLIM5-208ENST00000504489 FAM27E3Q08E93 113 aa10.51□□□□□ -0.73
PDLIM5-208ENST00000504489 P2RY6Q15077 328 aa10.51□□□□□ -0.73
PDLIM5-208ENST00000504489 TAF11Q15544 211 aa10.51□□□□□ -0.73
PDLIM5-208ENST00000504489 ATP6AP1Q15904 470 aa10.51□□□□□ -0.73
PDLIM5-208ENST00000504489 TSPO2Q5TGU0 170 aa10.51□□□□□ -0.73
PDLIM5-208ENST00000504489 STAC2Q6ZMT1 411 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms