RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 TTC33Q6PID6 262 aaPredicted RBP10.41□□□□□ -0.74
MED28-203ENST00000503945 LINC00114Q6XXX2 140 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 HIST3H2AQ7L7L0 130 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 PXKQ7Z7A4 578 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 RETREG3Q86VR2 466 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 PTOV1Q86YD1 416 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 PHC2Q8IXK0 858 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 ADPRHL1Q8NDY3 354 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 OR10A6Q8NH74 314 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 RASSF5Q8WWW0 418 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 FAM168AQ92567 244 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 HTRA1Q92743 480 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 HIST1H2ACQ93077 130 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 OR2M2Q96R28 347 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 ECSITQ9BQ95 431 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 WFDC6Q9BQY6 131 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 TMEM43Q9BTV4 400 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 YAE1D1Q9NRH1 226 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 CA10Q9NS85 328 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 MRPL39Q9NYK5 338 aaKnown RBP10.41□□□□□ -0.74
MED28-203ENST00000503945 CRNNQ9UBG3 495 aaPredicted RBP10.41□□□□□ -0.74
MED28-203ENST00000503945 FBXO9Q9UK97 447 aaPredicted RBP10.41□□□□□ -0.74
MED28-203ENST00000503945 POFUT2Q9Y2G5 429 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 IGHV4-30-2A0A087WSY4 118 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 SLC35F4A4IF30 521 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 ZNF99A8MXY4 864 aaPredicted RBP10.4□□□□□ -0.74
MED28-203ENST00000503945 B9A039 149 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 PLPP3O14495 311 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 CD5LO43866 347 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 FZD7O75084 574 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 NPPAP01160 153 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 BGLAPP02818 100 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 CSF3P09919 207 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 OR4A8P0C604 315 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 H2AFXP16104 143 aaPredicted RBP10.4□□□□□ -0.74
MED28-203ENST00000503945 SLC25A16P16260 332 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 PCBP3P57721 371 aaKnown RBP10.4□□□□□ -0.74
MED28-203ENST00000503945 SNRPD2P62316 118 aaKnown RBP10.4□□□□□ -0.74
MED28-203ENST00000503945 TUBA1BP68363 451 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 TUBA4AP68366 448 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 NAAAQ02083 359 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 PUDPQ08623 228 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 ENTPD8Q5MY95 495 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 NANOGP8Q6NSW7 305 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 PODNL1Q6PEZ8 512 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 VHLLQ6RSH7 139 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 TUBA1AQ71U36 451 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 HIPK1Q86Z02 1210 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 C20orf196Q8IYI0 205 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 OR6T1Q8NGN1 323 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 OR6N1Q8NGY5 312 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 OR5J2Q8NH18 312 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 PROX1Q92786 737 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 TXNDC15Q96J42 360 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 TNFRSF13CQ96RJ3 184 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 ARHGDIGQ99819 225 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 VRK1Q99986 396 aaPredicted RBP10.4□□□□□ -0.74
MED28-203ENST00000503945 EMC6Q9BV81 110 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 ZNF385DQ9H6B1 395 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 NANOGQ9H9S0 305 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 STAB1Q9NY15 2570 aa10.4□□□□□ -0.74
MED28-203ENST00000503945 CPSF4LA6NMK7 179 aaKnown RBP10.39□□□□□ -0.75
MED28-203ENST00000503945 M0R3H8 397 aa10.39□□□□□ -0.75
MED28-203ENST00000503945 TRAF3IP2O43734 574 aaPredicted RBP10.39□□□□□ -0.75
MED28-203ENST00000503945 CHP2O43745 196 aa10.39□□□□□ -0.75
MED28-203ENST00000503945 GPRIN2O60269 458 aa10.39□□□□□ -0.75
MED28-203ENST00000503945 CH25HO95992 272 aa10.39□□□□□ -0.75
MED28-203ENST00000503945 HPRP00739 348 aa10.39□□□□□ -0.75
MED28-203ENST00000503945 IFNA14P01570 189 aa10.39□□□□□ -0.75
MED28-203ENST00000503945 IGKV3-15P01624 115 aa10.39□□□□□ -0.75
MED28-203ENST00000503945 IGLV1-44P01699 117 aa10.39□□□□□ -0.75
MED28-203ENST00000503945 OPN1SWP03999 348 aa10.39□□□□□ -0.75
MED28-203ENST00000503945 CECR9P0C854 216 aa10.39□□□□□ -0.75
MED28-203ENST00000503945 ADORA3P0DMS8 318 aa10.39□□□□□ -0.75
MED28-203ENST00000503945 TROVE2P10155 538 aaKnown RBP eCLIP10.39□□□□□ -0.75
MED28-203ENST00000503945 HLA-DOBP13765 273 aa10.39□□□□□ -0.75
MED28-203ENST00000503945 ARFIP2P53365 341 aa10.39□□□□□ -0.75
MED28-203ENST00000503945 POU3F1Q03052 451 aaPredicted RBP10.39□□□□□ -0.75
MED28-203ENST00000503945 LOXL1Q08397 574 aaPredicted RBP10.39□□□□□ -0.75
MED28-203ENST00000503945 CAMK2DQ13557 499 aa10.39□□□□□ -0.75
MED28-203ENST00000503945 SELPLGQ14242 412 aa10.39□□□□□ -0.75
MED28-203ENST00000503945 VMACQ2NL98 169 aa10.39□□□□□ -0.75
MED28-203ENST00000503945 TMEM123Q8N131 208 aa10.39□□□□□ -0.75
MED28-203ENST00000503945 ZNF525Q8N782 197 aa10.39□□□□□ -0.75
MED28-203ENST00000503945 ADAMTS16Q8TE57 1224 aa10.39□□□□□ -0.75
MED28-203ENST00000503945 LRRC58Q96CX6 371 aa10.39□□□□□ -0.75
MED28-203ENST00000503945 ZNF837Q96EG3 531 aaPredicted RBP10.39□□□□□ -0.75
MED28-203ENST00000503945 MPP4Q96JB8 637 aa10.39□□□□□ -0.75
MED28-203ENST00000503945 MOGAT1Q96PD6 335 aa10.39□□□□□ -0.75
MED28-203ENST00000503945 RAB1BQ9H0U4 201 aa10.39□□□□□ -0.75
MED28-203ENST00000503945 NANSQ9NR45 359 aa10.39□□□□□ -0.75
MED28-203ENST00000503945 USP22Q9UPT9 525 aa10.39□□□□□ -0.75
MED28-203ENST00000503945 LOC100653049A0A140TA62 436 aa10.38□□□□□ -0.75
MED28-203ENST00000503945 TRAPPC13A5PLN9 417 aa10.38□□□□□ -0.75
MED28-203ENST00000503945 A8MV72 311 aaPredicted RBP10.38□□□□□ -0.75
MED28-203ENST00000503945 LRRN3E7EW58 273 aa10.38□□□□□ -0.75
MED28-203ENST00000503945 RNF13O43567 381 aa10.38□□□□□ -0.75
MED28-203ENST00000503945 SERPINI2O75830 405 aa10.38□□□□□ -0.75
MED28-203ENST00000503945 KRT34O76011 436 aa10.38□□□□□ -0.75
MED28-203ENST00000503945 PDE5AO76074 875 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms