RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 CMAHPQ9Y471 501 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 SMIM30A4D0T7 59 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 LOC110117498-PIK3R3F6TDL0 507 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 TBX1O43435 398 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 ITGA10O75578 1167 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 SNX4O95219 450 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 GBX2P52951 348 aaPredicted RBP19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 CAV3P56539 151 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 RPL27P61353 136 aaKnown RBP19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 ACKR1Q16570 336 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 ZNF684Q5T5D7 378 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 OR11G2Q8NGC1 345 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 ABHD4Q8TB40 342 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 SNX33Q8WV41 574 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 THAP4Q8WY91 577 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 MRPL48Q96GC5 212 aaKnown RBP19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 SDHCQ99643 169 aaPredicted RBP19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 MIXL1Q9H2W2 232 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 TXNIPQ9H3M7 391 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 CCDC86Q9H6F5 360 aaKnown RBP19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 CPNE5Q9HCH3 593 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 CHCHD2Q9Y6H1 151 aaPredicted RBP19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 R4GN57 208 aa19.26■□□□□ 0.67
UBE2D3-216ENST00000503742 RALGAPA1Q6GYQ0 2036 aa19.25■□□□□ 0.67
UBE2D3-216ENST00000503742 CFAP54Q96N23 3096 aa19.25■□□□□ 0.67
UBE2D3-216ENST00000503742 ISPDA4D126 451 aa19.25■□□□□ 0.67
UBE2D3-216ENST00000503742 ARHGEF9O43307 516 aa19.25■□□□□ 0.67
UBE2D3-216ENST00000503742 FOLR3P41439 243 aa19.25■□□□□ 0.67
UBE2D3-216ENST00000503742 MTNR1BP49286 362 aa19.25■□□□□ 0.67
UBE2D3-216ENST00000503742 MAP2K6P52564 334 aa19.25■□□□□ 0.67
UBE2D3-216ENST00000503742 CDK5R1Q15078 307 aa19.25■□□□□ 0.67
UBE2D3-216ENST00000503742 PLPPR5Q32ZL2 321 aa19.25■□□□□ 0.67
UBE2D3-216ENST00000503742 MINDY2Q8NBR6 621 aa19.25■□□□□ 0.67
UBE2D3-216ENST00000503742 NLGN4YQ8NFZ3 816 aaPredicted RBP19.25■□□□□ 0.67
UBE2D3-216ENST00000503742 MFSD8Q8NHS3 518 aa19.25■□□□□ 0.67
UBE2D3-216ENST00000503742 AP3S1Q92572 193 aa19.25■□□□□ 0.67
UBE2D3-216ENST00000503742 ARL5BQ96KC2 179 aa19.25■□□□□ 0.67
UBE2D3-216ENST00000503742 MRGPRX4Q96LA9 322 aa19.25■□□□□ 0.67
UBE2D3-216ENST00000503742 STRADBQ9C0K7 418 aa19.25■□□□□ 0.67
UBE2D3-216ENST00000503742 SYT4Q9H2B2 425 aa19.25■□□□□ 0.67
UBE2D3-216ENST00000503742 ABCB10Q9NRK6 738 aa19.25■□□□□ 0.67
UBE2D3-216ENST00000503742 V9GYH0 126 aa19.25■□□□□ 0.67
UBE2D3-216ENST00000503742 FUOMA2VDF0 154 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 CD1AP06126 327 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 TGM1P22735 817 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 AHCYP23526 432 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 ACVR1BP36896 505 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 SIRPAP78324 504 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 PXKQ7Z7A4 578 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 MS4A15Q8N5U1 240 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 FAM83FQ8NEG4 500 aaPredicted RBP19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 OR2M3Q8NG83 312 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 POC1BQ8TC44 478 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 GHSRQ92847 366 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 ITPKCQ96DU7 683 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 SMIM19Q96E16 107 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 ZPBPQ9BS86 351 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 PPIL3Q9H2H8 161 aaKnown RBP19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 ABCB9Q9NP78 766 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 EFNA2O43921 213 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 IGHEP01854 428 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 CD63P08962 238 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 IL11P20809 199 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 BCAP31P51572 246 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 ZP4Q12836 540 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 MFSD13AQ14CX5 517 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 TRIM16LQ309B1 348 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 CCDC58Q4VC31 144 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 STEAP3Q658P3 488 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 RPL22L1Q6P5R6 122 aaKnown RBP19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 TMEM81Q6P7N7 255 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 PLEKHG7Q6ZR37 379 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 NDUFAF7Q7L592 441 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 NAXDQ8IW45 347 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 PM20D2Q8IYS1 436 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 SCAIQ8N9R8 606 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 FRMD6Q96NE9 622 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 RNF32Q9H0A6 362 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 MARCH7Q9H992 704 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 ACOXLQ9NUZ1 547 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 GNG8Q9UK08 70 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 PADI1Q9ULC6 663 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 TRAPPC4Q9Y296 219 aa19.24■□□□□ 0.67
UBE2D3-216ENST00000503742 PRSS37A4D1T9 235 aa19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 PRR32B1ATL7 298 aa19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 XKRYO14609 159 aa19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 TP53I11O14683 189 aa19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 OR6A2O95222 327 aa19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 PLGP00747 810 aaPredicted RBP19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 GTF2E2P29084 291 aaKnown RBP19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 ZNF41P51814 821 aaPredicted RBP19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 INSM1Q01101 510 aaPredicted RBP19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 SNTA1Q13424 505 aa19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 INPP5JQ15735 1006 aaPredicted RBP19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 RAB11FIP2Q7L804 512 aa19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 CDC20BQ86Y33 519 aa19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 FADS6Q8N9I5 356 aa19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 ZBTB8BQ8NAP8 495 aaPredicted RBP19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 RPS4Y2Q8TD47 263 aa19.23■□□□□ 0.67
UBE2D3-216ENST00000503742 DDIT4LQ96D03 193 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms