RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 GPATCH2LQ9NWQ4 482 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 SIGLEC8Q9NYZ4 499 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 UBAP1Q9NZ09 502 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 IFNKQ9P0W0 207 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 STX18Q9P2W9 335 aaKnown RBP1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 CLN8Q9UBY8 286 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 TMCO1Q9UM00 188 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 L3MBTL1Q9Y468 752 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 USP16Q9Y5T5 823 aa1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 V9GYY5 206 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P35-201ENST00000503360 KCNE1BA0A087WTH5 132 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 KLF18A0A0U1RQI7 1052 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 SIRPB1O00241 398 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 RGS16O15492 202 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 CHST1O43916 411 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 HCN1O60741 890 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 SCRG1O75711 98 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 ATP5LO75964 103 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 ALDOBP05062 364 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 SERPINE2P07093 398 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 DCNP07585 359 aaKnown RBP1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 CD55P08174 381 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 UBCP0CG48 685 aaKnown RBP1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 MYL2P10916 166 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 PRPS2P11908 318 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 RNH1P13489 461 aaKnown RBP1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 CCL2P13500 99 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 HPGDP15428 266 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 ZNF43P17038 809 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 HOXB8P17481 243 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 CD82P27701 267 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 HTR2BP41595 481 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 QARSP47897 775 aaKnown RBP1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 LIM2P55344 173 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 RND3P61587 244 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 PSMC5P62195 406 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 RPL32P62910 135 aaKnown RBP1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 TNNC1P63316 161 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 VLDLRP98155 873 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 IRF8Q02556 426 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 RAD51Q06609 339 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 ST3GAL3Q11203 375 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 CDH17Q12864 832 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 GPR176Q14439 515 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 LAGE3Q14657 143 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 VAMP3Q15836 100 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 ZNF77Q15935 545 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 AANATQ16613 207 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 NDUFA9Q16795 377 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 HSDL1Q3SXM5 330 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 DMRTC1Q5HYR2 192 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 ZNF658Q5TYW1 1059 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 GPR157Q5UAW9 335 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 WSCD1Q658N2 575 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 C22orf42Q6IC83 251 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 OR52W1Q6IF63 320 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 SNX20Q7Z614 316 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 CADM2Q8N3J6 435 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 JAGN1Q8N5M9 183 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 ZNF525Q8N782 197 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 LINC00469Q8N7U9 141 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 C8orf31Q8N9H6 132 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 FNDC5Q8NAU1 212 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 B3GNT7Q8NFL0 401 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 OR4F6Q8NGB9 312 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 OR4D9Q8NGE8 314 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 OR4A15Q8NGL6 344 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 CCDC12Q8WUD4 166 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 MRPS31Q92665 395 aaKnown RBP1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 STMN2Q93045 179 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 PSMG2Q969U7 264 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 CXorf40BQ96DE9 158 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 C8orf76Q96K31 380 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 CYTH2Q99418 400 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 CNN2Q99439 309 aaKnown RBP1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 SLC29A1Q99808 456 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 OR52A5Q9H2C5 316 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 PPA2Q9H2U2 334 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 CSNK1G1Q9HCP0 422 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 MYOZ2Q9NPC6 264 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 INPP5EQ9NRR6 644 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 PTTG3PQ9NZH4 202 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 CTSFQ9UBX1 484 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 PHF11Q9UIL8 331 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 CLEC4EQ9ULY5 219 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 COPS3Q9UNS2 423 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 FLVCR2Q9UPI3 526 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 SCML2Q9UQR0 700 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 SAR1BQ9Y6B6 198 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 MROH7-TTC4A0A0A0MT08 1334 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 SH3TC1Q8TE82 1336 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 USP47Q96K76 1375 aa1.79□□□□□ -2.12
HMGB1P35-201ENST00000503360 CFAP65Q6ZU64 1925 aaKnown RBP1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 ATP10AO60312 1499 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 ANKRD30BQ9BXX2 1392 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 IGLV8-61A0A075B6I0 122 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 TRAV6A0A075B6T7 132 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 TRBV9A0A0B4J1U6 114 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 IGHV2-70DA0A0C4DH43 119 aa1.78□□□□□ -2.12
HMGB1P35-201ENST00000503360 IQANK1A0A1B0GTG1 560 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms