RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 DHFRP00374 187 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 BGLAPP02818 100 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 ATF1P18846 271 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 SRMP19623 302 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 MST1P26927 711 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 CSF2RBP32927 897 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 HCCSP53701 268 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 SUMO3P55854 103 aaPredicted RBP10.87□□□□□ -0.67
NUP54-202ENST00000502850 SCAND1P57086 179 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 SLC26A5P58743 744 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 MRPS10P82664 201 aaKnown RBP10.87□□□□□ -0.67
NUP54-202ENST00000502850 ACY1Q03154 408 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 RASGEF1BQ0VAM2 473 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 SGCBQ16585 318 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 SLC25A35Q3KQZ1 300 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 Q499Y3 187 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 GXYLT1Q4G148 440 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 EEF1A1P5Q5VTE0 462 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 IL20RBQ6UXL0 311 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 GRINAQ7Z429 371 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 NOXA1Q86UR1 476 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 CDC20BQ86Y33 519 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 TIGD4Q8IY51 512 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 TOMM5Q8N4H5 51 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 YIPF7Q8N8F6 280 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 ZNF441Q8N8Z8 693 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 OR13C5Q8NGS8 318 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 ZPLD1Q8TCW7 415 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 STK35Q8TDR2 534 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.87□□□□□ -0.67
NUP54-202ENST00000502850 ASB17Q8WXJ9 295 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 TMEM234Q8WY98 164 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 ZNF501Q96CX3 271 aaPredicted RBP10.87□□□□□ -0.67
NUP54-202ENST00000502850 KTI12Q96EK9 354 aaPredicted RBP10.87□□□□□ -0.67
NUP54-202ENST00000502850 TSPAN32Q96QS1 320 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 INTS14Q96SY0 518 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 DUSP23Q9BVJ7 150 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 TTTY10Q9BZA0 68 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 SLC7A5P2Q9GIP4 190 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 VN1R1Q9GZP7 353 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 COMMD4Q9H0A8 199 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 ABCG5Q9H222 651 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 FGF21Q9NSA1 209 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 ZNF275Q9NSD4 429 aaPredicted RBP10.87□□□□□ -0.67
NUP54-202ENST00000502850 MKL2Q9ULH7 1088 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 NUBP2Q9Y5Y2 271 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 ETV7Q9Y603 341 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 ALG5Q9Y673 324 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 FKBP7Q9Y680 259 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 MPDZO75970 2070 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 SPAG17Q6Q759 2223 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 A0A1B0GVT2 93 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 TMEM212A6NML5 194 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 A8MVM7 634 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 ARHGEF9O43307 516 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 EEF1E1O43324 174 aaKnown RBP10.87□□□□□ -0.67
NUP54-202ENST00000502850 LAMTOR5O43504 91 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 OR2T1O43869 369 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 RAF1P04049 648 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 CALCBP10092 127 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 FOLR1P15328 257 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 ARSBP15848 533 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 PRKCAP17252 672 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 ABCD3P28288 659 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 ERP29P30040 261 aaKnown RBP10.87□□□□□ -0.67
NUP54-202ENST00000502850 EVI2BP34910 448 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 AP3S2P59780 193 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 RRAS2P62070 204 aaPredicted RBP10.87□□□□□ -0.67
NUP54-202ENST00000502850 MADCAM1Q13477 382 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 ALKBH1Q13686 389 aaKnown RBP10.87□□□□□ -0.67
NUP54-202ENST00000502850 GPR176Q14439 515 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 MFSD13AQ14CX5 517 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 MESTQ5EB52 335 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 CEP78Q5JTW2 689 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 FAM69AQ5T7M9 428 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 SLC22A10Q63ZE4 541 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 RHBDD2Q6NTF9 364 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 LIX1LQ8IVB5 337 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 PRR22Q8IZ63 422 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 MAML2Q8IZL2 1156 aaPredicted RBP10.87□□□□□ -0.67
NUP54-202ENST00000502850 UBE2J2Q8N2K1 259 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 OR5AK2Q8NH90 309 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 METTL21AQ8WXB1 218 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 AKAP1Q92667 903 aaKnown RBP eCLIP10.87□□□□□ -0.67
NUP54-202ENST00000502850 TAAR8Q969N4 342 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 UPRTQ96BW1 309 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 DERL3Q96Q80 235 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 NIPAL2Q9H841 368 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 NOX4Q9NPH5 578 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 NUFIP1Q9UHK0 495 aaKnown RBP10.87□□□□□ -0.67
NUP54-202ENST00000502850 R4GN57 208 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 SPTBP11277 2137 aa10.87□□□□□ -0.67
NUP54-202ENST00000502850 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 A0A0B4J293 547 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.86□□□□□ -0.67
NUP54-202ENST00000502850 TMEM72A0PK05 275 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 SULT1B1O43704 296 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 OR6A2O95222 327 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 AHSA1O95433 338 aa10.86□□□□□ -0.67
NUP54-202ENST00000502850 ECDO95905 644 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms