RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 SAGP10523 405 aaPredicted RBP22.14■■□□□ 1.14
LSM6-202ENST00000502781 AQP2P41181 271 aa22.14■■□□□ 1.14
LSM6-202ENST00000502781 GPR4P46093 362 aa22.14■■□□□ 1.14
LSM6-202ENST00000502781 C22orf34Q6ZV56 151 aa22.14■■□□□ 1.14
LSM6-202ENST00000502781 ZNF433Q8N7K0 673 aaPredicted RBP22.14■■□□□ 1.14
LSM6-202ENST00000502781 PAPD5Q8NDF8 572 aaKnown RBP22.14■■□□□ 1.14
LSM6-202ENST00000502781 OR4C15Q8NGM1 316 aa22.14■■□□□ 1.14
LSM6-202ENST00000502781 MOSPD2Q8NHP6 518 aa22.14■■□□□ 1.14
LSM6-202ENST00000502781 WFIKKN1Q96NZ8 548 aa22.14■■□□□ 1.14
LSM6-202ENST00000502781 NDRG3Q9UGV2 375 aa22.14■■□□□ 1.14
LSM6-202ENST00000502781 AURKCQ9UQB9 309 aa22.14■■□□□ 1.14
LSM6-202ENST00000502781 EPXP11678 715 aa22.13■■□□□ 1.13
LSM6-202ENST00000502781 PPP3CBP16298 524 aa22.13■■□□□ 1.13
LSM6-202ENST00000502781 FOXG1P55316 489 aaPredicted RBP22.13■■□□□ 1.13
LSM6-202ENST00000502781 FAPQ12884 760 aa22.13■■□□□ 1.13
LSM6-202ENST00000502781 LAPTM4AQ15012 233 aa22.13■■□□□ 1.13
LSM6-202ENST00000502781 OR2T5Q6IEZ7 315 aa22.13■■□□□ 1.13
LSM6-202ENST00000502781 SLC35D2Q76EJ3 337 aa22.13■■□□□ 1.13
LSM6-202ENST00000502781 WDFY1Q8IWB7 410 aa22.13■■□□□ 1.13
LSM6-202ENST00000502781 STEAP2Q8NFT2 490 aa22.13■■□□□ 1.13
LSM6-202ENST00000502781 OR2T29Q8NH02 315 aa22.13■■□□□ 1.13
LSM6-202ENST00000502781 KISS1RQ969F8 398 aaPredicted RBP22.13■■□□□ 1.13
LSM6-202ENST00000502781 C14orf79Q96F83 325 aa22.13■■□□□ 1.13
LSM6-202ENST00000502781 FAM46AQ96IP4 442 aaKnown RBP22.13■■□□□ 1.13
LSM6-202ENST00000502781 CCM2LQ9NUG4 571 aaPredicted RBP22.13■■□□□ 1.13
LSM6-202ENST00000502781 TAS2R16Q9NYV7 291 aa22.13■■□□□ 1.13
LSM6-202ENST00000502781 CENPEQ02224 2701 aa22.13■■□□□ 1.13
LSM6-202ENST00000502781 SH3D21A4FU49 640 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 SLC35F4A4IF30 521 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 NPIPB13A6NJU9 1138 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 NPIPB4C9JG80 1138 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 ITGA5P08648 1049 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 IFNGR1P15260 489 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 LGALS3BPQ08380 585 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 DAZAP2Q15038 168 aaPredicted RBP22.12■■□□□ 1.13
LSM6-202ENST00000502781 ZER1Q7Z7L7 766 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 OAFQ86UD1 273 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 LRRC75AQ8NAA5 344 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 LRR1Q96L50 414 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 ADAD1Q96M93 576 aaKnown RBP22.12■■□□□ 1.13
LSM6-202ENST00000502781 TNFRSF13CQ96RJ3 184 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 EMC6Q9BV81 110 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 ACTR6Q9GZN1 396 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 VNN3Q9NY84 501 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 UPB1Q9UBR1 384 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 TNFRSF11BO00300 401 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 SLC43A1O75387 559 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 UPK3AO75631 287 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 SERPINI2O75830 405 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 LYZL6O75951 148 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 F13BP05160 661 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 TSC22D1Q15714 1073 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 ANKRD34AQ69YU3 496 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 LINGO2Q7L985 606 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 BHLHA15Q7RTS1 189 aaPredicted RBP22.12■■□□□ 1.13
LSM6-202ENST00000502781 OR13C2Q8NGS9 318 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 OR51A7Q8NH64 312 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 OR6X1Q8NH79 312 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 SLCO4A1Q96BD0 722 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 GPA33Q99795 319 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 USB1Q9BQ65 265 aaKnown RBP22.12■■□□□ 1.13
LSM6-202ENST00000502781 KRCC1Q9NPI7 259 aaPredicted RBP22.12■■□□□ 1.13
LSM6-202ENST00000502781 INIPQ9NRY2 104 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 TMCC3Q9ULS5 477 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 SIGLEC7Q9Y286 467 aa22.12■■□□□ 1.13
LSM6-202ENST00000502781 SETXQ7Z333 2677 aaKnown RBP22.11■■□□□ 1.13
LSM6-202ENST00000502781 TRAV27A0A087WT01 109 aa22.11■■□□□ 1.13
LSM6-202ENST00000502781 FAM221AA4D161 298 aa22.11■■□□□ 1.13
LSM6-202ENST00000502781 RPL36A-HNRNPH2H7BZ11 118 aa22.11■■□□□ 1.13
LSM6-202ENST00000502781 PTP4A3O75365 173 aa22.11■■□□□ 1.13
LSM6-202ENST00000502781 MPGP29372 298 aa22.11■■□□□ 1.13
LSM6-202ENST00000502781 GK3PQ14409 553 aa22.11■■□□□ 1.13
LSM6-202ENST00000502781 ZBED5Q49AG3 693 aa22.11■■□□□ 1.13
LSM6-202ENST00000502781 ALG10Q5BKT4 473 aa22.11■■□□□ 1.13
LSM6-202ENST00000502781 C1orf146Q5VVC0 180 aa22.11■■□□□ 1.13
LSM6-202ENST00000502781 YTHDF3Q7Z739 585 aaKnown RBP22.11■■□□□ 1.13
LSM6-202ENST00000502781 C20orf196Q8IYI0 205 aa22.11■■□□□ 1.13
LSM6-202ENST00000502781 S100PBPQ96BU1 408 aa22.11■■□□□ 1.13
LSM6-202ENST00000502781 BOD1Q96IK1 185 aa22.11■■□□□ 1.13
LSM6-202ENST00000502781 MCCC2Q9HCC0 563 aa22.11■■□□□ 1.13
LSM6-202ENST00000502781 CLOCKO15516 846 aa22.1■■□□□ 1.13
LSM6-202ENST00000502781 OR10H3O60404 316 aa22.1■■□□□ 1.13
LSM6-202ENST00000502781 FKBP6O75344 327 aa22.1■■□□□ 1.13
LSM6-202ENST00000502781 THBDP07204 575 aa22.1■■□□□ 1.13
LSM6-202ENST00000502781 ZNF26P17031 533 aaPredicted RBP22.1■■□□□ 1.13
LSM6-202ENST00000502781 IL32P24001 234 aa22.1■■□□□ 1.13
LSM6-202ENST00000502781 DNAJA1P31689 397 aaKnown RBP22.1■■□□□ 1.13
LSM6-202ENST00000502781 ERFP50548 548 aa22.1■■□□□ 1.13
LSM6-202ENST00000502781 BIDP55957 195 aa22.1■■□□□ 1.13
LSM6-202ENST00000502781 PRPS1P60891 318 aa22.1■■□□□ 1.13
LSM6-202ENST00000502781 ACKR1Q16570 336 aa22.1■■□□□ 1.13
LSM6-202ENST00000502781 ZNF770Q6IQ21 691 aaPredicted RBP22.1■■□□□ 1.13
LSM6-202ENST00000502781 C1orf94Q6P1W5 598 aa22.1■■□□□ 1.13
LSM6-202ENST00000502781 ABHD12BQ7Z5M8 362 aaPredicted RBP22.1■■□□□ 1.13
LSM6-202ENST00000502781 LINC00471Q8N535 108 aa22.1■■□□□ 1.13
LSM6-202ENST00000502781 MUS81Q96NY9 551 aa22.1■■□□□ 1.13
LSM6-202ENST00000502781 ALKBH3Q96Q83 286 aaPredicted RBP22.1■■□□□ 1.13
LSM6-202ENST00000502781 MED18Q9BUE0 208 aa22.1■■□□□ 1.13
LSM6-202ENST00000502781 REEP1Q9H902 201 aa22.1■■□□□ 1.13
LSM6-202ENST00000502781 A0A1W2PRG6 482 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms