RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 CRMP1Q14194 572 aa6.78□□□□□ -1.32
PDGFC-203ENST00000502773 ZNF124Q15973 351 aa6.78□□□□□ -1.32
PDGFC-203ENST00000502773 LEG1Q6P5S2 330 aa6.78□□□□□ -1.32
PDGFC-203ENST00000502773 LINC00114Q6XXX2 140 aa6.78□□□□□ -1.32
PDGFC-203ENST00000502773 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.78□□□□□ -1.32
PDGFC-203ENST00000502773 YIPF7Q8N8F6 280 aa6.78□□□□□ -1.32
PDGFC-203ENST00000502773 CCDC54Q8NEL0 328 aa6.78□□□□□ -1.32
PDGFC-203ENST00000502773 GPR148Q8TDV2 347 aa6.78□□□□□ -1.32
PDGFC-203ENST00000502773 C2CD4CQ8TF44 421 aa6.78□□□□□ -1.32
PDGFC-203ENST00000502773 PIGKQ92643 395 aa6.78□□□□□ -1.32
PDGFC-203ENST00000502773 UCN3Q969E3 161 aa6.78□□□□□ -1.32
PDGFC-203ENST00000502773 C4orf36Q96KX1 117 aa6.78□□□□□ -1.32
PDGFC-203ENST00000502773 CCDC74BQ96LY2 380 aa6.78□□□□□ -1.32
PDGFC-203ENST00000502773 CRB3Q9BUF7 120 aa6.78□□□□□ -1.32
PDGFC-203ENST00000502773 B3GNT4Q9C0J1 378 aa6.78□□□□□ -1.32
PDGFC-203ENST00000502773 WDR76Q9H967 626 aa6.78□□□□□ -1.32
PDGFC-203ENST00000502773 MED11Q9P086 117 aa6.78□□□□□ -1.32
PDGFC-203ENST00000502773 KCNG2Q9UJ96 466 aa6.78□□□□□ -1.32
PDGFC-203ENST00000502773 IKZF2Q9UKS7 526 aa6.78□□□□□ -1.32
PDGFC-203ENST00000502773 VSTM2BA6NLU5 285 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 ANXA2P2A6NMY6 339 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 FOXS1O43638 330 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 ZFAND5O76080 213 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 ANXA2P07355 339 aaKnown RBP6.77□□□□□ -1.33
PDGFC-203ENST00000502773 SYPP08247 313 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 ANKRD34CP0C6C1 535 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 MAKP20794 623 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 SSTR4P31391 388 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 ZNF41P51814 821 aaPredicted RBP6.77□□□□□ -1.33
PDGFC-203ENST00000502773 SSBP1Q04837 148 aaKnown RBP6.77□□□□□ -1.33
PDGFC-203ENST00000502773 TOMM34Q15785 309 aaPredicted RBP6.77□□□□□ -1.33
PDGFC-203ENST00000502773 DEFB110Q30KQ9 67 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 GLT8D1Q68CQ7 371 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 MAMSTRQ6ZN01 415 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 C12orf45Q8N5I9 185 aaPredicted RBP6.77□□□□□ -1.33
PDGFC-203ENST00000502773 OR1N1Q8NGS0 311 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 OR4K13Q8NH42 304 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 SLC25A43Q8WUT9 341 aaPredicted RBP6.77□□□□□ -1.33
PDGFC-203ENST00000502773 INTS14Q96SY0 518 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 CMKLR1Q99788 373 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 GHITMQ9H3K2 345 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 NIPAL2Q9H841 368 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 TAS2R10Q9NYW0 307 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 SEMA5BQ9P283 1151 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 PIP5K1CO60331 668 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 IGFBP1P08833 259 aaPredicted RBP6.77□□□□□ -1.33
PDGFC-203ENST00000502773 HOXB3P14651 431 aaPredicted RBP6.77□□□□□ -1.33
PDGFC-203ENST00000502773 HTR2AP28223 471 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 EIF1P41567 113 aaKnown RBP6.77□□□□□ -1.33
PDGFC-203ENST00000502773 ACAA2P42765 397 aaKnown RBP6.77□□□□□ -1.33
PDGFC-203ENST00000502773 HOXC5Q00444 222 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 FLI1Q01543 452 aaPredicted RBP6.77□□□□□ -1.33
PDGFC-203ENST00000502773 DLX2Q07687 328 aaPredicted RBP6.77□□□□□ -1.33
PDGFC-203ENST00000502773 UBE2NLQ5JXB2 153 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 ZNF676Q8N7Q3 588 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 OR5AK2Q8NH90 309 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 PNPLA2Q96AD5 504 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 ZG16BQ96DA0 208 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 SLC41A2Q96JW4 573 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 FYTTD1Q96QD9 318 aaKnown RBP6.77□□□□□ -1.33
PDGFC-203ENST00000502773 TPSD1Q9BZJ3 242 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 PRELID3BQ9Y3B1 194 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 IGHV1OR21-1A0A087WYE8 117 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 NPIPA5E9PKD4 350 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 SOCS6O14544 535 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 CTDSPLO15194 276 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 HRO43593 1189 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 EPPINO95925 133 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 ERCC1P07992 297 aaPredicted RBP6.77□□□□□ -1.33
PDGFC-203ENST00000502773 RGS19P49795 217 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 MLLT10P55197 1068 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 FBXW4P57775 412 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 FABP5Q01469 135 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 DYRK1AQ13627 763 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 DEFB133Q30KQ1 61 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 PTCRAQ6ISU1 281 aaPredicted RBP6.77□□□□□ -1.33
PDGFC-203ENST00000502773 SFXN4Q6P4A7 337 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 UBQLNLQ8IYU4 475 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 PFN4Q8NHR9 129 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 LHFPL5Q8TAF8 219 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 NUBPLQ8TB37 319 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 NSMAFQ92636 917 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 ARSGQ96EG1 525 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 WDR77Q9BQA1 342 aaPredicted RBP6.77□□□□□ -1.33
PDGFC-203ENST00000502773 ALG12Q9BV10 488 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 MMP28Q9H239 520 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 CD93Q9NPY3 652 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 CYSLTR2Q9NS75 346 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 TAS2R16Q9NYV7 291 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 NPIPA1Q9UND3 350 aa6.77□□□□□ -1.33
PDGFC-203ENST00000502773 LRRK1Q38SD2 2015 aa6.76□□□□□ -1.33
PDGFC-203ENST00000502773 TRAV27A0A087WT01 109 aa6.76□□□□□ -1.33
PDGFC-203ENST00000502773 A0A1B0GVI7 797 aa6.76□□□□□ -1.33
PDGFC-203ENST00000502773 UBE2QL1A1L167 161 aa6.76□□□□□ -1.33
PDGFC-203ENST00000502773 C1orf196B1AJZ1 125 aa6.76□□□□□ -1.33
PDGFC-203ENST00000502773 INMT-MINDY4F8WBC2 141 aa6.76□□□□□ -1.33
PDGFC-203ENST00000502773 HTR3BO95264 441 aa6.76□□□□□ -1.33
PDGFC-203ENST00000502773 CER1O95813 267 aa6.76□□□□□ -1.33
PDGFC-203ENST00000502773 LIMK1P53667 647 aa6.76□□□□□ -1.33
PDGFC-203ENST00000502773 DCDP81605 110 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms