RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 OR2M2Q96R28 347 aa9.46□□□□□ -0.9
UBE2D3-212ENST00000502563 CADM1Q9BY67 442 aaKnown RBP9.46□□□□□ -0.9
UBE2D3-212ENST00000502563 NDEL1Q9GZM8 345 aa9.46□□□□□ -0.9
UBE2D3-212ENST00000502563 ACTR6Q9GZN1 396 aa9.46□□□□□ -0.9
UBE2D3-212ENST00000502563 NGBQ9NPG2 151 aa9.46□□□□□ -0.9
UBE2D3-212ENST00000502563 SLC7A10Q9NS82 523 aa9.46□□□□□ -0.9
UBE2D3-212ENST00000502563 SEC14L4Q9UDX3 406 aa9.46□□□□□ -0.9
UBE2D3-212ENST00000502563 SLC7A8Q9UHI5 535 aa9.46□□□□□ -0.9
UBE2D3-212ENST00000502563 PRSS50Q9UI38 385 aa9.46□□□□□ -0.9
UBE2D3-212ENST00000502563 POMPQ9Y244 141 aa9.46□□□□□ -0.9
UBE2D3-212ENST00000502563 UTP20O75691 2785 aaKnown RBP9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 SH3PXD2BA1X283 911 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 ARRDC5A6NEK1 342 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 OR5H1A6NKK0 313 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 LRRN3E7EW58 273 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 EBAG9O00559 213 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 KLF4O43474 513 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 AHCYL1O43865 530 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 ENTPD5O75356 428 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 CTAG2O75638 210 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 GADD45GO95257 159 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 HPRP00739 348 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 ITGA5P08648 1049 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 APEHP13798 732 aaKnown RBP9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 IL32P24001 234 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 EDNRAP25101 427 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 OMPP47874 163 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 DAP3P51398 398 aaKnown RBP9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 CLDN17P56750 224 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 POU3F1Q03052 451 aaPredicted RBP9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 RPL18Q07020 188 aaKnown RBP9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 FHL1Q13642 323 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 C1DQ13901 141 aaKnown RBP9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 FLOT2Q14254 428 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 HIST3H3Q16695 136 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 C3orf36Q3SXR2 165 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 ZNF787Q6DD87 383 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 CYP2R1Q6VVX0 501 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 BHLHA15Q7RTS1 189 aaPredicted RBP9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 CXorf67Q86X51 503 aaPredicted RBP9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 P3H2Q8IVL5 708 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 C20orf196Q8IYI0 205 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 C10orf53Q8N6V4 93 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 OR4K5Q8NGD3 323 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 CCDC124Q96CT7 223 aaKnown RBP9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 DUS3LQ96G46 650 aaKnown RBP9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 SLC25A44Q96H78 314 aaPredicted RBP9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 WFIKKN1Q96NZ8 548 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 MED18Q9BUE0 208 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 YY1AP1Q9H869 796 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 SMURF2Q9HAU4 748 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 RASSF1Q9NS23 344 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 UPB1Q9UBR1 384 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 MAGED1Q9Y5V3 778 aaPredicted RBP9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 CRYBG3Q68DQ2 2970 aa9.45□□□□□ -0.9
UBE2D3-212ENST00000502563 CELSR2Q9HCU4 2923 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 ARPC4-TTLL3A0A0A6YYG9 625 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 A0A1W2PRG6 482 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 DHRS12A0PJE2 317 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 ZNF587BE7ETH6 402 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 hCG_2039718K7EN88 272 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 KPNA4O00629 521 aaPredicted RBP9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 CASKO14936 926 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 RNF13O43567 381 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 IFI30P13284 250 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 FUT4P22083 530 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 FPR3P25089 353 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 YAP1P46937 504 aaKnown RBP9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 SELENOPP49908 381 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 TLE4Q04727 773 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 GABRA6Q16445 453 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 EXOC3L2Q2M3D2 409 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 ALG10Q5BKT4 473 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 BEX5Q5H9J7 111 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 C1orf94Q6P1W5 598 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 NIPAL3Q6P499 406 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 PODNL1Q6PEZ8 512 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 SEZ6L2Q6UXD5 910 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 SLC35D2Q76EJ3 337 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 OAFQ86UD1 273 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 ADGRG5Q8IZF4 528 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 LRRC17Q8N6Y2 441 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 LRRC75AQ8NAA5 344 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 LINC01560Q8TB33 94 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 DNAJA3Q96EY1 480 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 CLPTM1LQ96KA5 538 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 MRPL13Q9BYD1 178 aaKnown RBP9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 TXNIPQ9H3M7 391 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 DENND2DQ9H6A0 471 aaPredicted RBP9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 B3GAT2Q9NPZ5 323 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 INIPQ9NRY2 104 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 CCM2LQ9NUG4 571 aaPredicted RBP9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 SIGLEC7Q9Y286 467 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 AMDHD2Q9Y303 409 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 LYVE1Q9Y5Y7 322 aa9.44□□□□□ -0.9
UBE2D3-212ENST00000502563 TRBV4-1A0A0J9YWV2 114 aa9.43□□□□□ -0.9
UBE2D3-212ENST00000502563 SLC35F4A4IF30 521 aa9.43□□□□□ -0.9
UBE2D3-212ENST00000502563 ZNF726A6NNF4 738 aa9.43□□□□□ -0.9
UBE2D3-212ENST00000502563 DEFB108AA8MXU0 73 aa9.43□□□□□ -0.9
UBE2D3-212ENST00000502563 ZNF99A8MXY4 864 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms