RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 CARD17Q5XLA6 110 aa11.93□□□□□ -0.5
CCDC58-207ENST00000498466 TREML4Q6UXN2 200 aa11.93□□□□□ -0.5
CCDC58-207ENST00000498466 RAB39BQ96DA2 213 aa11.93□□□□□ -0.5
CCDC58-207ENST00000498466 CCDC115Q96NT0 180 aa11.93□□□□□ -0.5
CCDC58-207ENST00000498466 ZIM3Q96PE6 472 aa11.93□□□□□ -0.5
CCDC58-207ENST00000498466 OR2M2Q96R28 347 aa11.93□□□□□ -0.5
CCDC58-207ENST00000498466 PANX1Q96RD7 426 aa11.93□□□□□ -0.5
CCDC58-207ENST00000498466 PTDSS2Q9BVG9 487 aa11.93□□□□□ -0.5
CCDC58-207ENST00000498466 NTN4Q9HB63 628 aa11.93□□□□□ -0.5
CCDC58-207ENST00000498466 BTNL2Q9UIR0 455 aa11.93□□□□□ -0.5
CCDC58-207ENST00000498466 ZNF346Q9UL40 294 aaKnown RBP11.93□□□□□ -0.5
CCDC58-207ENST00000498466 PPIAL4AQ9Y536 164 aa11.93□□□□□ -0.5
CCDC58-207ENST00000498466 CORINQ9Y5Q5 1042 aa11.93□□□□□ -0.5
CCDC58-207ENST00000498466 TLDC2A0PJX2 215 aa11.92□□□□□ -0.5
CCDC58-207ENST00000498466 E9PBE3 544 aa11.92□□□□□ -0.5
CCDC58-207ENST00000498466 J3QLI3 93 aa11.92□□□□□ -0.5
CCDC58-207ENST00000498466 AIM2O14862 343 aa11.92□□□□□ -0.5
CCDC58-207ENST00000498466 RAB36O95755 333 aa11.92□□□□□ -0.5
CCDC58-207ENST00000498466 NUDT17P0C025 328 aa11.92□□□□□ -0.5
CCDC58-207ENST00000498466 HKR1P10072 659 aa11.92□□□□□ -0.5
CCDC58-207ENST00000498466 FPR2P25090 351 aa11.92□□□□□ -0.5
CCDC58-207ENST00000498466 EGR4Q05215 589 aa11.92□□□□□ -0.5
CCDC58-207ENST00000498466 FXNQ16595 210 aa11.92□□□□□ -0.5
CCDC58-207ENST00000498466 PHYHD1Q5SRE7 291 aa11.92□□□□□ -0.5
CCDC58-207ENST00000498466 ZNF813Q6ZN06 617 aa11.92□□□□□ -0.5
CCDC58-207ENST00000498466 ZNF621Q6ZSS3 439 aa11.92□□□□□ -0.5
CCDC58-207ENST00000498466 SERPINA11Q86U17 422 aa11.92□□□□□ -0.5
CCDC58-207ENST00000498466 LRRC34Q8IZ02 419 aa11.92□□□□□ -0.5
CCDC58-207ENST00000498466 TMEM123Q8N131 208 aa11.92□□□□□ -0.5
CCDC58-207ENST00000498466 CLIP4Q8N3C7 705 aa11.92□□□□□ -0.5
CCDC58-207ENST00000498466 TCP10LQ8TDR4 215 aa11.92□□□□□ -0.5
CCDC58-207ENST00000498466 KTI12Q96EK9 354 aaPredicted RBP11.92□□□□□ -0.5
CCDC58-207ENST00000498466 P2RX2Q9UBL9 471 aa11.92□□□□□ -0.5
CCDC58-207ENST00000498466 ZNF443Q9Y2A4 671 aaPredicted RBP11.92□□□□□ -0.5
CCDC58-207ENST00000498466 POFUT2Q9Y2G5 429 aa11.92□□□□□ -0.5
CCDC58-207ENST00000498466 M0R082 166 aa11.91□□□□□ -0.5
CCDC58-207ENST00000498466 PRSS23O95084 383 aa11.91□□□□□ -0.5
CCDC58-207ENST00000498466 ARAFP10398 606 aa11.91□□□□□ -0.5
CCDC58-207ENST00000498466 B4GALT1P15291 398 aa11.91□□□□□ -0.5
CCDC58-207ENST00000498466 LSP1P33241 339 aa11.91□□□□□ -0.5
CCDC58-207ENST00000498466 CDKN2CP42773 168 aa11.91□□□□□ -0.5
CCDC58-207ENST00000498466 GIPRP48546 466 aa11.91□□□□□ -0.5
CCDC58-207ENST00000498466 AQP5P55064 265 aa11.91□□□□□ -0.5
CCDC58-207ENST00000498466 NME5P56597 212 aa11.91□□□□□ -0.5
CCDC58-207ENST00000498466 RAB1AP62820 205 aa11.91□□□□□ -0.5
CCDC58-207ENST00000498466 CCL8P80075 99 aa11.91□□□□□ -0.5
CCDC58-207ENST00000498466 ZP4Q12836 540 aa11.91□□□□□ -0.5
CCDC58-207ENST00000498466 LARS2Q15031 903 aaKnown RBP11.91□□□□□ -0.5
CCDC58-207ENST00000498466 MAPK11Q15759 364 aa11.91□□□□□ -0.5
CCDC58-207ENST00000498466 MIDNQ504T8 468 aa11.91□□□□□ -0.5
CCDC58-207ENST00000498466 RNF220Q5VTB9 566 aa11.91□□□□□ -0.5
CCDC58-207ENST00000498466 RBMS3Q6XE24 437 aaKnown RBP11.91□□□□□ -0.5
CCDC58-207ENST00000498466 ZNF417Q8TAU3 575 aa11.91□□□□□ -0.5
CCDC58-207ENST00000498466 RNF217Q8TC41 542 aa11.91□□□□□ -0.5
CCDC58-207ENST00000498466 ZNF75AQ96N20 296 aa11.91□□□□□ -0.5
CCDC58-207ENST00000498466 ZNF587Q96SQ5 575 aaPredicted RBP11.91□□□□□ -0.5
CCDC58-207ENST00000498466 ARMC7Q9H6L4 198 aa11.91□□□□□ -0.5
CCDC58-207ENST00000498466 C7orf69Q9H7B7 122 aa11.91□□□□□ -0.5
CCDC58-207ENST00000498466 CACYBPQ9HB71 228 aaKnown RBP11.91□□□□□ -0.5
CCDC58-207ENST00000498466 B3GAT2Q9NPZ5 323 aa11.91□□□□□ -0.5
CCDC58-207ENST00000498466 CALML5Q9NZT1 146 aa11.91□□□□□ -0.5
CCDC58-207ENST00000498466 TAAR3PQ9P1P4 343 aa11.91□□□□□ -0.5
CCDC58-207ENST00000498466 SLC7A8Q9UHI5 535 aa11.91□□□□□ -0.5
CCDC58-207ENST00000498466 DSPPQ9NZW4 1301 aa11.9□□□□□ -0.5
CCDC58-207ENST00000498466 C17orf100A8MU93 164 aa11.9□□□□□ -0.5
CCDC58-207ENST00000498466 TRAF3IP2O43734 574 aaPredicted RBP11.9□□□□□ -0.5
CCDC58-207ENST00000498466 OR2T1O43869 369 aa11.9□□□□□ -0.5
CCDC58-207ENST00000498466 DEAF1O75398 565 aaPredicted RBP11.9□□□□□ -0.5
CCDC58-207ENST00000498466 BCHEP06276 602 aa11.9□□□□□ -0.5
CCDC58-207ENST00000498466 BPGMP07738 259 aa11.9□□□□□ -0.5
CCDC58-207ENST00000498466 CBLP22681 906 aa11.9□□□□□ -0.5
CCDC58-207ENST00000498466 RAD52P43351 418 aa11.9□□□□□ -0.5
CCDC58-207ENST00000498466 CRISP3P54108 245 aa11.9□□□□□ -0.5
CCDC58-207ENST00000498466 SELENOVP59797 346 aa11.9□□□□□ -0.5
CCDC58-207ENST00000498466 MFSD13AQ14CX5 517 aa11.9□□□□□ -0.5
CCDC58-207ENST00000498466 RGS7BPQ6MZT1 257 aaPredicted RBP11.9□□□□□ -0.5
CCDC58-207ENST00000498466 TMEM154Q6P9G4 183 aa11.9□□□□□ -0.5
CCDC58-207ENST00000498466 H1FNTQ75WM6 255 aaPredicted RBP11.9□□□□□ -0.5
CCDC58-207ENST00000498466 UEVLDQ8IX04 471 aa11.9□□□□□ -0.5
CCDC58-207ENST00000498466 C20orf196Q8IYI0 205 aa11.9□□□□□ -0.5
CCDC58-207ENST00000498466 LRRC17Q8N6Y2 441 aa11.9□□□□□ -0.5
CCDC58-207ENST00000498466 ZNF781Q8N8C0 355 aa11.9□□□□□ -0.5
CCDC58-207ENST00000498466 SNX33Q8WV41 574 aa11.9□□□□□ -0.5
CCDC58-207ENST00000498466 EMC6Q9BV81 110 aa11.9□□□□□ -0.5
CCDC58-207ENST00000498466 HINT3Q9NQE9 182 aaKnown RBP11.9□□□□□ -0.5
CCDC58-207ENST00000498466 GPR160Q9UJ42 338 aa11.9□□□□□ -0.5
CCDC58-207ENST00000498466 ZNF232Q9UNY5 417 aa11.9□□□□□ -0.5
CCDC58-207ENST00000498466 A0A0G2JK05 382 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 TPD52L2O43399 206 aaKnown RBP11.89□□□□□ -0.51
CCDC58-207ENST00000498466 ITM2AO43736 263 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 UBL3O95164 117 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 KRT75O95678 551 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 IGHV2-5P01817 119 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 NQO1P15559 274 aaKnown RBP11.89□□□□□ -0.51
CCDC58-207ENST00000498466 GATA3P23771 443 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 GRPRP30550 384 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 HOXC5Q00444 222 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 TEKQ02763 1124 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 RAB39AQ14964 217 aa11.89□□□□□ -0.51
CCDC58-207ENST00000498466 PCGF3Q3KNV8 242 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms