RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 PTGES3LE9PB15 166 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 M0R3G1 203 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 WWP2O00308 870 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 HCRTR2O43614 444 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 RGS10O43665 173 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 CDC40O60508 579 aaKnown RBP eCLIP4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 HCN1O60741 890 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 TRMUO75648 421 aaKnown RBP4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 OR6B1O95007 311 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 TNFSF15O95150 251 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 LYPD3O95274 346 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 SOX14O95416 240 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 NUDT14O95848 222 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 HPP00738 406 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 IGF2P01344 180 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 SAGP10523 405 aaPredicted RBP4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 COX6A1P12074 109 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 CXCR1P25024 350 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 CD82P27701 267 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 HTR2AP28223 471 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 EPHA2P29317 976 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 FMO3P31513 532 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 OTX2P32243 289 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 EVI2BP34910 448 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 SLC1A3P43003 542 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 GPR4P46093 362 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 HTR3AP46098 478 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 SLC9A3P48764 834 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 CCR4P51679 360 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 CDH15P55291 814 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 SUMO3P55854 103 aaPredicted RBP4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 SNRPGP62308 76 aaKnown RBP4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 CDK5Q00535 292 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 SKP2Q13309 424 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 DNASE1L3Q13609 305 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 GINS1Q14691 196 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 TMEM44Q2T9K0 475 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 CTU2Q2VPK5 515 aaKnown RBP4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 ANKDD1AQ495B1 522 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 FAM69BQ5VUD6 431 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 TMEM236Q5W0B7 351 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 C12orf73Q69YU5 71 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 TMEM200BQ69YZ2 307 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 KIRREL2Q6UWL6 708 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 ISLR2Q6UXK2 745 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 APOOLQ6UXV4 268 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 Q6ZPB1 254 aaPredicted RBP4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 RTL4Q6ZR62 310 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 KCTD8Q6ZWB6 473 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 TIPARPQ7Z3E1 657 aaKnown RBP4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 GPR141Q7Z602 305 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 MARCH3Q86UD3 253 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 VASH2Q86V25 355 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 SATL1Q86VE3 508 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 RAB43Q86YS6 212 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 STX19Q8N4C7 294 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 GATSQ8NAP1 163 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 POGLUT1Q8NBL1 392 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 NLGN4YQ8NFZ3 816 aaPredicted RBP4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 OR52L1Q8NGH7 329 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 OR5W2Q8NH69 310 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 CNIH3Q8TBE1 160 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 DUSP19Q8WTR2 217 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 CT55Q8WUE5 264 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 TMEM234Q8WY98 164 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 C3orf49Q96BT1 292 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 NMD3Q96D46 503 aaKnown RBP4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 SGTBQ96EQ0 304 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 PLEKHA8Q96JA3 519 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 IMMP1LQ96LU5 166 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 IP6K3Q96PC2 410 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 NODALQ96S42 347 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 GPA33Q99795 319 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 TUBA1CQ9BQE3 449 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 TMEM43Q9BTV4 400 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 TSSK6Q9BXA6 273 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 POLDIP3Q9BY77 421 aaKnown RBP4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 NDEL1Q9GZM8 345 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 CCDC90BQ9GZT6 254 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 DUSP21Q9H596 190 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 LIN28AQ9H9Z2 209 aaKnown RBP4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 PALMDQ9NP74 551 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 TBC1D23Q9NUY8 699 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 MED17Q9NVC6 651 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 ZNF226Q9NYT6 803 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 TVP23BQ9NYZ1 205 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 CNIH4Q9P003 139 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 H2AFY2Q9P0M6 372 aaPredicted RBP4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 RSL24D1Q9UHA3 163 aaKnown RBP4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 PAIP2BQ9ULR5 123 aaKnown RBP4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 ICAM5Q9UMF0 924 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 BAIAP2Q9UQB8 552 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 YARS2Q9Y2Z4 477 aaKnown RBP4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 HS3ST3B1Q9Y662 390 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 CDH10Q9Y6N8 788 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 SPG11Q96JI7 2443 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 COL27A1Q8IZC6 1860 aaPredicted RBP4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 EFCAB10A6NFE3 127 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 CCDC160A6NGH7 325 aa4.78□□□□□ -1.64
HMGXB4-208ENST00000498325 STMND1H3BQB6 276 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms