RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 USP22Q9UPT9 525 aa10.22□□□□□ -0.77
NUDCD3-211ENST00000497978 ANGPT4Q9Y264 503 aa10.22□□□□□ -0.77
NUDCD3-211ENST00000497978 CORINQ9Y5Q5 1042 aa10.22□□□□□ -0.77
NUDCD3-211ENST00000497978 GMEB1Q9Y692 573 aa10.22□□□□□ -0.77
NUDCD3-211ENST00000497978 ARFGEF3Q5TH69 2177 aa10.22□□□□□ -0.77
NUDCD3-211ENST00000497978 A0A087WUJ7 227 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 ZNF99A8MXY4 864 aaPredicted RBP10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 M0R3G1 203 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 TPST1O60507 370 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 IGHV4-31P0DP07 118 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 GPX2P18283 190 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 CBLP22681 906 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 CALCRP30988 508 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 NR4A2P43354 598 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 PPOXP50336 477 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 IDH3GP51553 393 aaPredicted RBP10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 NPRL3Q12980 569 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 PMS2P3Q13401 168 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 SQLEQ14534 574 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 OR1Q1Q15612 314 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 IQCCQ4KMZ1 466 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 SNX32Q86XE0 403 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 C10orf53Q8N6V4 93 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 SCAIQ8N9R8 606 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 ZNF540Q8NDQ6 660 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 HIPK4Q8NE63 616 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 IL17RDQ8NFM7 739 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 TMEM158Q8WZ71 300 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 ANKRD27Q96NW4 1050 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 SHARPINQ9H0F6 387 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 NELFAQ9H3P2 528 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 PLK3Q9H4B4 646 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 ZNF442Q9H7R0 627 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 NOX1Q9Y5S8 564 aa10.21□□□□□ -0.77
NUDCD3-211ENST00000497978 YLPM1P49750 1951 aaKnown RBP10.21□□□□□ -0.78
NUDCD3-211ENST00000497978 IGKV1D-42A0A075B6H8 117 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 TRBV5-3A0A0A0MS03 114 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 A0A0B4J2E0 115 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 A0A1B0GX12 115 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 ZNF726A6NNF4 738 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 VWC2LB2RUY7 222 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 MS4A18H0YCH9 400 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 hCG_2039718K7EN88 272 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 TRAF3IP2O43734 574 aaPredicted RBP10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 LMX1BO60663 402 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 APEHP13798 732 aaKnown RBP10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 ZNF16P17020 682 aaPredicted RBP10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 NPR2P20594 1047 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 AQP1P29972 269 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 THBS4P35443 961 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 POU3F1Q03052 451 aaPredicted RBP10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 MS4A18Q3C1V0 323 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 GLIPR1L2Q4G1C9 344 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 CARD17Q5XLA6 110 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 FAM166AQ6J272 317 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 COMTD1Q86VU5 262 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 C20orf196Q8IYI0 205 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 TMEM123Q8N131 208 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 C10orf111Q8N326 155 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 ANKS4BQ8N8V4 417 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 SLC41A3Q96GZ6 507 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 LRR1Q96L50 414 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 ATP6V1G3Q96LB4 118 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 FOXN4Q96NZ1 517 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 TMEM43Q9BTV4 400 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 SLC52A3Q9NQ40 469 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 LEF1Q9UJU2 399 aaPredicted RBP10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 KCNS2Q9ULS6 477 aa10.2□□□□□ -0.78
NUDCD3-211ENST00000497978 IGHV2OR16-5A0A0B4J2B6 119 aa10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 LOC100289279A0A1B0GTE1 492 aa10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 MT-ATP6P00846 226 aa10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 BGLAPP02818 100 aa10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 VIMP08670 466 aaKnown RBP10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 CELA3BP08861 270 aa10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 CD79AP11912 226 aa10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 AHCYP23526 432 aa10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 CDH12P55289 794 aa10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 HGFACQ04756 655 aa10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 PUDPQ08623 228 aa10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 RBBP4Q09028 425 aa10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 DAG1Q14118 895 aa10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 ADRM1Q16186 407 aa10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 CYP51A1Q16850 503 aa10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 RUNDC3AQ59EK9 446 aa10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 SPATA21Q7Z572 469 aa10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 MDP1Q86V88 176 aa10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 C11orf65Q8NCR3 313 aa10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 OR6N1Q8NGY5 312 aa10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 NEU4Q8WWR8 484 aaPredicted RBP10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 ZNF837Q96EG3 531 aaPredicted RBP10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 CPPED1Q9BRF8 314 aaPredicted RBP10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 EMC6Q9BV81 110 aa10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 RSPO3Q9BXY4 272 aaPredicted RBP10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 IKZF5Q9H5V7 419 aa10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 SEC61A2Q9H9S3 476 aa10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 DYNLRB1Q9NP97 96 aa10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 MRPL39Q9NYK5 338 aaKnown RBP10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 TRIM33Q9UPN9 1127 aa10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 POFUT2Q9Y2G5 429 aa10.19□□□□□ -0.78
NUDCD3-211ENST00000497978 SPEF1Q9Y4P9 236 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms