RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 UROSP10746 265 aa3.36□□□□□ -1.87
MDM2-220ENST00000496959 TCN2P20062 427 aa3.36□□□□□ -1.87
MDM2-220ENST00000496959 FUT3P21217 361 aa3.36□□□□□ -1.87
MDM2-220ENST00000496959 CMA1P23946 247 aa3.36□□□□□ -1.87
MDM2-220ENST00000496959 SYKP43405 635 aa3.36□□□□□ -1.87
MDM2-220ENST00000496959 KIAA1024LP59773 190 aa3.36□□□□□ -1.87
MDM2-220ENST00000496959 CCL7P80098 99 aa3.36□□□□□ -1.87
MDM2-220ENST00000496959 PUDPQ08623 228 aa3.36□□□□□ -1.87
MDM2-220ENST00000496959 CCDC14Q49A88 953 aa3.36□□□□□ -1.87
MDM2-220ENST00000496959 ZCWPW2Q504Y3 356 aa3.36□□□□□ -1.87
MDM2-220ENST00000496959 PMF1Q6P1K2 205 aa3.36□□□□□ -1.87
MDM2-220ENST00000496959 TMEM110Q86TL2 294 aa3.36□□□□□ -1.87
MDM2-220ENST00000496959 LINC01555Q8NAE3 123 aa3.36□□□□□ -1.87
MDM2-220ENST00000496959 ZNF397Q8NF99 534 aaPredicted RBP3.36□□□□□ -1.87
MDM2-220ENST00000496959 OR2AP1Q8NGE2 309 aa3.36□□□□□ -1.87
MDM2-220ENST00000496959 OR4D9Q8NGE8 314 aa3.36□□□□□ -1.87
MDM2-220ENST00000496959 OR56A4Q8NGH8 313 aa3.36□□□□□ -1.87
MDM2-220ENST00000496959 KLK6Q92876 244 aa3.36□□□□□ -1.87
MDM2-220ENST00000496959 KLF6Q99612 283 aaPredicted RBP3.36□□□□□ -1.87
MDM2-220ENST00000496959 GSDMCQ9BYG8 508 aa3.36□□□□□ -1.87
MDM2-220ENST00000496959 Q9H3A6 140 aa3.36□□□□□ -1.87
MDM2-220ENST00000496959 ZCCHC3Q9NUD5 404 aaKnown RBP3.36□□□□□ -1.87
MDM2-220ENST00000496959 TRPC4Q9UBN4 977 aa3.36□□□□□ -1.87
MDM2-220ENST00000496959 ENTPD4Q9Y227 616 aa3.36□□□□□ -1.87
MDM2-220ENST00000496959 OR51B4Q9Y5P0 310 aa3.36□□□□□ -1.87
MDM2-220ENST00000496959 SHANK1Q9Y566 2161 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 TRBV7-9A0A0J9YWB2 115 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 A0A1W2PQ67 120 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 HEATR9A2RTY3 570 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 ARPC1BO15143 372 aaKnown RBP3.35□□□□□ -1.87
MDM2-220ENST00000496959 RAD51BO15315 384 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 RAD1O60671 282 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 SMC2O95347 1197 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 MT-ND3P03897 115 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 THRAP10827 490 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 UCP2P55851 309 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 SRP54P61011 504 aaKnown RBP3.35□□□□□ -1.87
MDM2-220ENST00000496959 GNA12Q03113 381 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 NME3Q13232 169 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 IL18R1Q13478 541 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 EIF2B1Q14232 305 aaKnown RBP3.35□□□□□ -1.87
MDM2-220ENST00000496959 IRF4Q15306 451 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 CAMK4Q16566 473 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 CCDC40Q4G0X9 1142 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 SYPL2Q5VXT5 272 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 NKAIN2Q5VXU1 208 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 SPECC1LQ69YQ0 1117 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 ARCQ7LC44 396 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 TAF8Q7Z7C8 310 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 VPS36Q86VN1 386 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 RANBP3LQ86VV4 465 aaPredicted RBP3.35□□□□□ -1.87
MDM2-220ENST00000496959 C9orf40Q8IXQ3 194 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 DEFB106AQ8N104 65 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 OR10G6Q8NH81 332 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 HTR3CQ8WXA8 447 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 STARD8Q92502 1023 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 NDRG1Q92597 394 aaKnown RBP3.35□□□□□ -1.87
MDM2-220ENST00000496959 DNAJA3Q96EY1 480 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 DHTKD1Q96HY7 919 aaPredicted RBP3.35□□□□□ -1.87
MDM2-220ENST00000496959 GPR137Q96N19 417 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 ZNF641Q96N77 438 aaPredicted RBP3.35□□□□□ -1.87
MDM2-220ENST00000496959 GSDMAQ96QA5 445 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 ZYG11BQ9C0D3 744 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 ALG9Q9H6U8 611 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 SLC39A1Q9NY26 324 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.35□□□□□ -1.87
MDM2-220ENST00000496959 XPO7Q9UIA9 1087 aaKnown RBP3.35□□□□□ -1.87
MDM2-220ENST00000496959 TRMT6Q9UJA5 497 aaKnown RBP3.35□□□□□ -1.87
MDM2-220ENST00000496959 KLK12Q9UKR0 248 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 DNPEPQ9ULA0 475 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 MFHAS1Q9Y4C4 1052 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 ATMQ13315 3056 aa3.35□□□□□ -1.87
MDM2-220ENST00000496959 RAI1Q7Z5J4 1906 aaPredicted RBP3.34□□□□□ -1.87
MDM2-220ENST00000496959 DOPEY1Q5JWR5 2465 aa3.34□□□□□ -1.87
MDM2-220ENST00000496959 DIDO1Q9BTC0 2240 aaKnown RBP3.34□□□□□ -1.87
MDM2-220ENST00000496959 SYNJ2BP-COX16A0A087WUM0 186 aa3.34□□□□□ -1.87
MDM2-220ENST00000496959 TSPAN11A1L157 253 aa3.34□□□□□ -1.87
MDM2-220ENST00000496959 C21orf140B9A014 251 aa3.34□□□□□ -1.87
MDM2-220ENST00000496959 TOX3O15405 576 aaPredicted RBP3.34□□□□□ -1.87
MDM2-220ENST00000496959 MAGEB4O15481 346 aaPredicted RBP3.34□□□□□ -1.87
MDM2-220ENST00000496959 CA11O75493 328 aa3.34□□□□□ -1.87
MDM2-220ENST00000496959 LSM8O95777 96 aaKnown RBP3.34□□□□□ -1.87
MDM2-220ENST00000496959 UGT2B4P06133 528 aa3.34□□□□□ -1.87
MDM2-220ENST00000496959 CCNB1P14635 433 aa3.34□□□□□ -1.87
MDM2-220ENST00000496959 TEAD1P28347 426 aa3.34□□□□□ -1.87
MDM2-220ENST00000496959 CASP1P29466 404 aa3.34□□□□□ -1.87
MDM2-220ENST00000496959 SULT1E1P49888 294 aa3.34□□□□□ -1.87
MDM2-220ENST00000496959 AIF1P55008 147 aa3.34□□□□□ -1.87
MDM2-220ENST00000496959 YBEYP58557 167 aaPredicted RBP3.34□□□□□ -1.87
MDM2-220ENST00000496959 RHOAP61586 193 aa3.34□□□□□ -1.87
MDM2-220ENST00000496959 C1orf61Q13536 156 aa3.34□□□□□ -1.87
MDM2-220ENST00000496959 KLHL40Q2TBA0 621 aa3.34□□□□□ -1.87
MDM2-220ENST00000496959 SLC25A52Q3SY17 297 aa3.34□□□□□ -1.87
MDM2-220ENST00000496959 PARP15Q460N3 678 aa3.34□□□□□ -1.87
MDM2-220ENST00000496959 TMEM52BQ4KMG9 183 aa3.34□□□□□ -1.87
MDM2-220ENST00000496959 IRGCQ6NXR0 463 aa3.34□□□□□ -1.87
MDM2-220ENST00000496959 FAM173BQ6P4H8 233 aa3.34□□□□□ -1.87
MDM2-220ENST00000496959 WDR74Q6RFH5 385 aaPredicted RBP3.34□□□□□ -1.87
MDM2-220ENST00000496959 B3GLCTQ6Y288 498 aa3.34□□□□□ -1.87
MDM2-220ENST00000496959 SLC22A16Q86VW1 577 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms