RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 DECR1Q16698 335 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 ALG11Q2TAA5 492 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 NSUN5P2Q63ZY6 315 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 TBC1D3CQ6IPX1 549 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 MED27Q6P2C8 311 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 ZNF620Q6ZNG0 422 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 TBC1D3Q8IZP1 549 aaPredicted RBP8.32□□□□□ -1.08
HPS4-217ENST00000496385 GPBAR1Q8TDU6 330 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 CXorf40AQ8TE69 158 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 EID2BQ96D98 161 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 SMIM19Q96E16 107 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 HS6ST2Q96MM7 605 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 MRPL37Q9BZE1 423 aaKnown RBP8.32□□□□□ -1.08
HPS4-217ENST00000496385 S1PR5Q9H228 398 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 CXorf36Q9H7Y0 433 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 ZDHHC3Q9NYG2 299 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 HAO2Q9NYQ3 351 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 CACFD1Q9UGQ2 172 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 ST6GALNAC2Q9UJ37 374 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 CD207Q9UJ71 328 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 PCDHGA1Q9Y5H4 931 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 WIF1Q9Y5W5 379 aa8.32□□□□□ -1.08
HPS4-217ENST00000496385 MYO16Q9Y6X6 1858 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 A0A087X0M5 115 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 A0A1B0GX30 115 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 URADA6NGE7 173 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 SEC14L6B5MCN3 397 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 F5H5T6 163 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 KLF4O43474 513 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 FARS2O95363 451 aaKnown RBP8.31□□□□□ -1.08
HPS4-217ENST00000496385 GBAP04062 536 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 FAM157CP0CG43 387 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 TACR2P21452 398 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 PCP4P48539 62 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 NUTF2P61970 127 aaKnown RBP8.31□□□□□ -1.08
HPS4-217ENST00000496385 RAB1AP62820 205 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 ACY1Q03154 408 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 AWAT2Q6E213 333 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 PWWP2BQ6NUJ5 590 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 SSX6Q7RTT6 188 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 COMMD6Q7Z4G1 85 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 DPPA2Q7Z7J5 298 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 CCDC116Q8IYX3 515 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 SYS1Q8N2H4 156 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 TMEM99Q8N816 258 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 SMRP1Q8NCR6 262 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 BEND2Q8NDZ0 799 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 C17orf47Q8NEP4 570 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 BBS1Q8NFJ9 593 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 STEAP2Q8NFT2 490 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 OR56B1Q8NGI3 324 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 OR4C16Q8NGL9 310 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 HMGB4Q8WW32 186 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 S100PBPQ96BU1 408 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 SMIM8Q96KF7 97 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 NECAB3Q96P71 396 aaPredicted RBP8.31□□□□□ -1.08
HPS4-217ENST00000496385 CDC6Q99741 560 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 LMAN1LQ9HAT1 526 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 BCO1Q9HAY6 547 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 IL26Q9NPH9 171 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 PLSCR2Q9NRY7 297 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 LPAR3Q9UBY5 353 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 ZMIZ1Q9ULJ6 1067 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 SLC35A3Q9Y2D2 325 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 AK6Q9Y3D8 172 aaKnown RBP8.31□□□□□ -1.08
HPS4-217ENST00000496385 A0A0D9SEW6 157 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 TEX13DA0A0J9YY54 714 aaPredicted RBP8.31□□□□□ -1.08
HPS4-217ENST00000496385 A0A1W2PRU2 124 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 M0R3H8 397 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 HMGN4O00479 90 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 FBXO24O75426 580 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 GLSO94925 669 aaPredicted RBP8.31□□□□□ -1.08
HPS4-217ENST00000496385 FGF19O95750 216 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 OR4E1P0C645 316 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 NDUFS1P28331 727 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 EPHB3P54753 998 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 NHLH2Q02577 135 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 RBM39Q14498 530 aaKnown RBP8.31□□□□□ -1.08
HPS4-217ENST00000496385 MST1LQ2TV78 715 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 PCGF3Q3KNV8 242 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 CLEC12AQ5QGZ9 265 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 PRAMEF8Q5VWM4 474 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 PRAMEF7Q5VXH5 474 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 EIF5AL1Q6IS14 154 aaKnown RBP8.31□□□□□ -1.08
HPS4-217ENST00000496385 PTCRAQ6ISU1 281 aaPredicted RBP8.31□□□□□ -1.08
HPS4-217ENST00000496385 HIST2H3AQ71DI3 136 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 FCRLAQ7L513 359 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 OR10H4Q8NGA5 316 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 SYNPRQ8TBG9 265 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 C4orf36Q96KX1 117 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 SPOCK3Q9BQ16 436 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 EXO5Q9H790 373 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 ZFYVE1Q9HBF4 777 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 MRPS30Q9NP92 439 aaKnown RBP8.31□□□□□ -1.08
HPS4-217ENST00000496385 PIKFYVEQ9Y2I7 2098 aa8.31□□□□□ -1.08
HPS4-217ENST00000496385 SLC38A8A6NNN8 435 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 MAGEB4O15481 346 aaPredicted RBP8.3□□□□□ -1.08
HPS4-217ENST00000496385 RD3LP0DJH9 198 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 SRMP19623 302 aa8.3□□□□□ -1.08
HPS4-217ENST00000496385 DVL1P1P54792 670 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms