RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 UEVLDQ8IX04 471 aa12.24□□□□□ -0.45
VARS-228ENST00000495010 BPIFB2Q8N4F0 458 aa12.24□□□□□ -0.45
VARS-228ENST00000495010 ZNF417Q8TAU3 575 aa12.24□□□□□ -0.45
VARS-228ENST00000495010 SLC38A4Q969I6 547 aa12.24□□□□□ -0.45
VARS-228ENST00000495010 YIPF5Q969M3 257 aa12.24□□□□□ -0.45
VARS-228ENST00000495010 ZNF587Q96SQ5 575 aaPredicted RBP12.24□□□□□ -0.45
VARS-228ENST00000495010 PTDSS2Q9BVG9 487 aa12.24□□□□□ -0.45
VARS-228ENST00000495010 NUF2Q9BZD4 464 aa12.24□□□□□ -0.45
VARS-228ENST00000495010 RACGAP1Q9H0H5 632 aa12.24□□□□□ -0.45
VARS-228ENST00000495010 B3GNT2Q9NY97 397 aa12.24□□□□□ -0.45
VARS-228ENST00000495010 SEC14L4Q9UDX3 406 aa12.24□□□□□ -0.45
VARS-228ENST00000495010 LGALS13Q9UHV8 139 aa12.24□□□□□ -0.45
VARS-228ENST00000495010 GPR160Q9UJ42 338 aa12.24□□□□□ -0.45
VARS-228ENST00000495010 FZR1Q9UM11 496 aa12.24□□□□□ -0.45
VARS-228ENST00000495010 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.24□□□□□ -0.45
VARS-228ENST00000495010 DSPPQ9NZW4 1301 aa12.23□□□□□ -0.45
VARS-228ENST00000495010 A0A0G2JMP0 313 aa12.23□□□□□ -0.45
VARS-228ENST00000495010 A0A0G2JPF8 293 aa12.23□□□□□ -0.45
VARS-228ENST00000495010 A0A0X1KG70 313 aa12.23□□□□□ -0.45
VARS-228ENST00000495010 HNRNPCL2B2RXH8 293 aa12.23□□□□□ -0.45
VARS-228ENST00000495010 HNRNPCL3B7ZW38 293 aa12.23□□□□□ -0.45
VARS-228ENST00000495010 WNT9BO14905 357 aa12.23□□□□□ -0.45
VARS-228ENST00000495010 HNRNPCL1O60812 293 aaKnown RBP12.23□□□□□ -0.45
VARS-228ENST00000495010 HNRNPCL4P0DMR1 293 aa12.23□□□□□ -0.45
VARS-228ENST00000495010 NAT2P11245 290 aa12.23□□□□□ -0.45
VARS-228ENST00000495010 ZNF35P13682 527 aa12.23□□□□□ -0.45
VARS-228ENST00000495010 ETFAP13804 333 aa12.23□□□□□ -0.45
VARS-228ENST00000495010 CBLP22681 906 aa12.23□□□□□ -0.45
VARS-228ENST00000495010 SELENOVP59797 346 aa12.23□□□□□ -0.45
VARS-228ENST00000495010 DSTNP60981 165 aa12.23□□□□□ -0.45
VARS-228ENST00000495010 EGR4Q05215 589 aa12.23□□□□□ -0.45
VARS-228ENST00000495010 NKPD1Q17RQ9 610 aa12.23□□□□□ -0.45
VARS-228ENST00000495010 MSMPQ1L6U9 139 aa12.23□□□□□ -0.45
VARS-228ENST00000495010 AWAT1Q58HT5 328 aa12.23□□□□□ -0.45
VARS-228ENST00000495010 RPS26P11Q5JNZ5 115 aaPredicted RBP12.23□□□□□ -0.45
VARS-228ENST00000495010 FAM69AQ5T7M9 428 aa12.23□□□□□ -0.45
VARS-228ENST00000495010 C5orf46Q6UWT4 87 aa12.23□□□□□ -0.45
VARS-228ENST00000495010 NET1Q7Z628 596 aaPredicted RBP12.23□□□□□ -0.45
VARS-228ENST00000495010 LRP11Q86VZ4 500 aa12.23□□□□□ -0.45
VARS-228ENST00000495010 OR4M2Q8NGB6 313 aa12.23□□□□□ -0.45
VARS-228ENST00000495010 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.23□□□□□ -0.45
VARS-228ENST00000495010 TEX37Q96LM6 180 aa12.23□□□□□ -0.45
VARS-228ENST00000495010 DENND2DQ9H6A0 471 aaPredicted RBP12.23□□□□□ -0.45
VARS-228ENST00000495010 ZNF385DQ9H6B1 395 aa12.23□□□□□ -0.45
VARS-228ENST00000495010 THUMPD1Q9NXG2 353 aaKnown RBP12.23□□□□□ -0.45
VARS-228ENST00000495010 B3GAT1Q9P2W7 334 aa12.23□□□□□ -0.45
VARS-228ENST00000495010 FBXL3Q9UKT7 428 aa12.23□□□□□ -0.45
VARS-228ENST00000495010 ZNF726A6NNF4 738 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 UBL3O95164 117 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 MPZL1O95297 269 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 ZNF14P17017 642 aaPredicted RBP12.22□□□□□ -0.45
VARS-228ENST00000495010 GRPRP30550 384 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 ETV4P43268 484 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 GIPRP48546 466 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 SLC1A6P48664 564 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 ARFIP2P53365 341 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 LMO4P61968 165 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 RAB1AP62820 205 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 HOXC5Q00444 222 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 MAPK11Q15759 364 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 ALKBH6Q3KRA9 238 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 PHYHD1Q5SRE7 291 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 TMEM154Q6P9G4 183 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 C20orf196Q8IYI0 205 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 TMEM123Q8N131 208 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 OR6N1Q8NGY5 312 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 RNF217Q8TC41 542 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 SLC38A5Q8WUX1 472 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 SNX33Q8WV41 574 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 TAAR8Q969N4 342 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 RAB39BQ96DA2 213 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 TMEM19Q96HH6 336 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 ROPN1BQ9BZX4 212 aaPredicted RBP12.22□□□□□ -0.45
VARS-228ENST00000495010 ZNF665Q9H7R5 613 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 ROPN1Q9HAT0 212 aaPredicted RBP12.22□□□□□ -0.45
VARS-228ENST00000495010 AIG1Q9NVV5 245 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 MYEF2Q9P2K5 600 aaKnown RBP12.22□□□□□ -0.45
VARS-228ENST00000495010 SLC7A8Q9UHI5 535 aa12.22□□□□□ -0.45
VARS-228ENST00000495010 TRAV36DV7A0A075B6V5 113 aa12.21□□□□□ -0.45
VARS-228ENST00000495010 LOC102725191A0A1B0GVB3 256 aa12.21□□□□□ -0.45
VARS-228ENST00000495010 CDC14BO60729 498 aa12.21□□□□□ -0.45
VARS-228ENST00000495010 B4GALT1P15291 398 aa12.21□□□□□ -0.45
VARS-228ENST00000495010 IL12AP29459 219 aa12.21□□□□□ -0.45
VARS-228ENST00000495010 AQP5P55064 265 aa12.21□□□□□ -0.45
VARS-228ENST00000495010 TEKQ02763 1124 aa12.21□□□□□ -0.45
VARS-228ENST00000495010 MVKQ03426 396 aa12.21□□□□□ -0.45
VARS-228ENST00000495010 CAMK2DQ13557 499 aa12.21□□□□□ -0.45
VARS-228ENST00000495010 MFSD13AQ14CX5 517 aa12.21□□□□□ -0.45
VARS-228ENST00000495010 PDCD4Q53EL6 469 aaKnown RBP12.21□□□□□ -0.45
VARS-228ENST00000495010 AVPI1Q5T686 147 aa12.21□□□□□ -0.45
VARS-228ENST00000495010 RGS7BPQ6MZT1 257 aaPredicted RBP12.21□□□□□ -0.45
VARS-228ENST00000495010 OGFOD2Q6N063 350 aa12.21□□□□□ -0.45
VARS-228ENST00000495010 C1QL2Q7Z5L3 287 aa12.21□□□□□ -0.45
VARS-228ENST00000495010 TREML1Q86YW5 311 aa12.21□□□□□ -0.45
VARS-228ENST00000495010 GLB1L3Q8NCI6 653 aaPredicted RBP12.21□□□□□ -0.45
VARS-228ENST00000495010 NANPQ8TBE9 248 aa12.21□□□□□ -0.45
VARS-228ENST00000495010 LRR1Q96L50 414 aa12.21□□□□□ -0.45
VARS-228ENST00000495010 FOXB1Q99853 325 aa12.21□□□□□ -0.45
VARS-228ENST00000495010 SLC6A7Q99884 636 aa12.21□□□□□ -0.45
VARS-228ENST00000495010 EMC6Q9BV81 110 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms